KEGG   Gordonia phthalatica: ACH46_12390
Entry
ACH46_12390       CDS       T04097                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
goq  Gordonia phthalatica
Pathway
goq03030  DNA replication
goq03430  Mismatch repair
goq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:goq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACH46_12390
   03430 Mismatch repair
    ACH46_12390
   03440 Homologous recombination
    ACH46_12390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:goq03032]
    ACH46_12390
   03400 DNA repair and recombination proteins [BR:goq03400]
    ACH46_12390
Enzymes [BR:goq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ACH46_12390
DNA replication proteins [BR:goq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ACH46_12390
DNA repair and recombination proteins [BR:goq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ACH46_12390
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C
Other DBs
NCBI-ProteinID: ALG85130
UniProt: A0A0N9NBW7
Position
complement(2637020..2640559)
AA seq 1179 aa
MSGSFVHLHNHTEYSMLDGAAKMSPLFAEADRLGMTAIGMTDHGNMFGASEFYNTAKKHD
IKPIIGIEAYIAPESRFNTKRVLWGTRDQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASIEGQLGKWARMDAEIIAEHANGIIATTGCPSGEVQTRLRLGHDREALEAAAKWQEI
FGKENFYLELMEHGLEIEQRVRSGLLDIGRKLGIKPLVTNDCHYVTQERSTAHEALLCLQ
TGKTLSDPTRFKFDGDGYYLKSAEEMRQLWDDVVPGGCDSTLEIGERVQSYDEVWQHHDR
MPIFPVPDGYTQESWLAHEVMAGLDRRFNGNPPAEYIKRAEYEMGVINQMGFPAYFLVVG
DLISHALEVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDID
FDDRRRSEMITYASNKWGHDKVAQVITFGTIKTKAAIKDSARVQFGQPGYAIADRITKAL
PPPIMAKDIPVWGITDPEHERYSEAAEVRTLIETDPDVKKIYDTALGLEGLVRNAGVHAC
AVIMSCEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIENIK
TNRGIDLDLNTLPLEDEKTYELLARGDTLGVFQLDGAAMRELLKMMQPTGFEDIVAVLAL
YRPGPMGVNAHTDYAKRKNGLQDIKPIHPELEEPLKEILAETYGLIVYQEQIMQIAQKVA
GYSLGQADLLRRAMGKKKKAILDEAYDGFAEGMRTNGFSQDAITALWDTVLPFAGYAFNK
SHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAIYLADCRKMGITVLPPDVNA
SRADFAAVGEDIRFGLAAIRNVGTGVVSSIISAREEKGAFANFSDYLGKIDVHACSKKVT
ESLIKAGGFDSMGHDRKGLFLVHADAIDAVLSTKKAEAIGQFDLFGGAGAGDDAVDDVFA
VKVPEDEWDTKHKLALERDMLGLYVSGHPLAGLEHAIAAQTDTSIHSLLEGEVRDGAQIT
IGGIISSVTRRVNKKGEPWAAVTIEDMVGGVEVYFFPRAYVAYGMDLVADNIVLVRARVN
KRDDSTMISANDLAVPDLSAVGTTKPLNLTLSARVCTPDRVSALKQILVRHPGTSDVTVT
LVSERNKQTQLRLTDALRVAPTSALMGDLKALLGPGCLA
NT seq 3540 nt   +upstreamnt  +downstreamnt
gtgtcggggtcgttcgttcatcttcacaatcacaccgagtactcgatgctcgacggtgcc
gcgaagatgtcgccgctgttcgccgaagcagatcggctggggatgaccgcgatcggcatg
accgaccacggaaacatgttcggcgccagcgagttctacaacaccgccaagaagcacgac
atcaaaccgatcatcggcatcgaggcgtacatcgccccggagtcgcggttcaacaccaag
cgagtcctgtggggcacccgcgaccagaagggcgacgacgtgtccggctcgggcgcgtac
acgcacatgacgatggtcgccgagaacgcgaccggactgcggaacctcttcaagctgtcg
tcgctcgcgtccatcgagggtcagctcggcaagtgggctcgcatggacgccgagatcatc
gccgagcacgcgaacggcatcatcgcgaccaccggctgcccgtcgggtgaagtccagact
cgactgcgcctcggccacgaccgggaggcactggaagccgccgccaagtggcaggagatc
ttcggcaaggagaacttctacctggagctgatggagcacggcctggagatcgagcagcgg
gtgcgctcggggctgctcgacatcggtcgcaagctcggcatcaagccgctggtcaccaac
gactgccactacgtgacgcaggagcggtcgacggcccacgaggcgctcctgtgcctgcag
accggcaagaccctgtcggatccgacgcgattcaagttcgacggcgacggctactacctg
aagtcggccgaggagatgcgccagttgtgggacgacgtcgtcccgggcggctgcgactcg
accctggagatcggggagcgcgtccagtcgtacgacgaggtgtggcagcatcacgaccgg
atgccgatcttcccggtgcccgacgggtacacgcaggagtcgtggctggcgcacgaggtg
atggccggtctggaccgtcggttcaacggcaatccgcccgccgagtacatcaagcgggcc
gagtacgagatgggcgtcatcaaccagatgggcttcccggcctacttcctggtggtcggc
gacctcatctcgcacgctctggaggtcgggatccgcgtcgggcccggtcgtggttcggcc
gccgggtcgctggtcgcctacgcgatgggcatcaccaacatcgaccccattccgcacggt
ctgctgttcgagcggttcctgaaccccgagcgcgtgtcgatgcccgatatcgacatcgac
ttcgacgaccgtcggcgcagcgagatgatcacctacgcgtccaacaagtggggccacgac
aaggtggcacaggtcatcaccttcggcaccattaagacgaaggccgcgatcaaggactcg
gcgcgcgtccagttcggtcagcccggctacgcgatcgccgaccgcatcaccaaggcgctg
ccgccgcccatcatggccaaggacatcccggtgtggggcatcaccgacccggagcacgag
cggtactccgaggcggccgaggtccgcacgctgatcgagaccgatcccgacgtcaagaag
atctacgacaccgcactcggcctcgagggcctggtccgtaacgccggcgtccacgcctgc
gcggtgatcatgtcgtgcgaaccgctcaccgacgcgatcccggtgtggaagcgcgcccag
gacggtgccatcatcaccgggtgggactacccgtcctgcgaggccatcggcctgctgaag
atggacttcctgggcctgcgcaacctgacggtcatcggcgacgcgatcgagaacatcaag
accaaccgcggcatcgacctcgacctcaacacgctgccgctcgaggacgagaagacctac
gagctgctggcccgcggcgacaccctcggcgtcttccagctcgacggcgcggccatgcgc
gaactgctgaagatgatgcagcccaccggcttcgaggacatcgtcgccgttctcgcgctg
taccgaccgggtccgatgggtgtcaacgcgcacaccgactacgccaagcgcaagaacggc
ctgcaggacatcaagccgatccacccggaactcgaggaaccgctgaaggagatcctcgcc
gagacgtacggtctgatcgtctaccaggagcagatcatgcagatcgctcagaaggtggcg
ggctactccctcggtcaggccgacctgctgcgtcgcgccatgggtaagaagaagaaggcc
atcctggacgaggcctatgacggcttcgccgagggcatgaggaccaacggtttctcgcag
gacgccatcaccgccctgtgggacaccgtccttccgttcgccggctacgcgttcaacaag
tcgcacgccgcgggctacggcctggtctccttctggaccgcgtacctgaaggccaattac
ccggccgagtacatggccggtctgctgacgtccgtcggcgacgacaaggacaaggccgcc
atctacctggccgactgccgcaagatgggcatcaccgtgctgccgcccgacgtcaacgct
tcgcgcgccgacttcgccgccgtcggtgaggacatccgtttcggcctcgccgcgatccgc
aacgtcggcaccggcgtcgtctcctcgatcatctcggcccgcgaggagaagggggcgttc
gccaacttctccgactacctcgggaagatcgacgtccacgcctgcagcaagaaggtcacg
gagtccctgatcaaggccggcggcttcgactcgatgggacacgaccgcaaggggctgttc
ctggtgcacgccgacgcgatcgacgcggtgctgtcgacgaagaaggccgaggccatcggt
cagttcgacctcttcggcggcgccggagcgggcgacgacgcggtggacgacgtcttcgcg
gtcaaggtccccgaggacgagtgggacaccaagcacaagctcgccttggaacgcgacatg
ctcggcctgtacgtgtccgggcacccgttggccggactcgagcacgcgatcgcggcgcag
accgacacgtcgatccactcgctgctcgaaggcgaggtgcgcgacggcgcgcagatcacc
atcggcggcatcatctcgtcggtcacccgccgggtgaacaagaagggtgagccctgggcc
gcggtcaccatcgaagacatggtcggtggcgtcgaggtgtacttcttcccccgcgcgtac
gtcgcgtacggcatggacctggtggccgacaacatcgtcctggtgcgagcccgcgtcaac
aagcgcgacgactcgacgatgatcagcgccaacgacctcgccgttcccgacctgtccgcg
gtgggcaccaccaagccgctcaacctgaccctgtcggcgcgtgtgtgcacgccggaccgt
gtgagtgcgctgaagcagatcctggtgcgtcaccccggcacgtccgacgtgacggtcacc
ctggtcagcgagcgcaacaagcagacccaactgcggttgaccgacgccctgcgcgtcgcc
ccgacgtcggcgctgatgggcgatctgaaggcgctgctgggaccggggtgcctcgcgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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