KEGG   Gordonia sp. KTR9: KTR9_2002Help
Entry
KTR9_2002         CDS       T02216                                 

Definition
Formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gor  Gordonia sp. KTR9
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gor00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    KTR9_2002
Enzymes [BR:gor01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     KTR9_2002
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     KTR9_2002
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2280841..2281746
Genome map
AA seq 301 aa AA seqDB search
MPELPEVETVRIGLETHLVGRVVASTEVLHPRAIRRHLGGEPDLIGRLAGKQVTGVRRRG
KYLWIDLADSADRAALVVHLGMSGQMLIARTGTPDHTHLRVRAVLDDENELRFVDQRTFG
GWHLDDYTPDAYALENGAAPADIPMSVAHIATDPFDPAFDAGRVVDRMRAKHSEIKRVLL
DQTVISGVGNIYADEALWRARLHGARIAETISRKKLRELIDAVTEVMASALKVGGTSFDA
LYVNVNGQSGYFERSLNAYGRAGEPCRRCGAIMRREQFMNRSSFFCPRCQRPPSRGSGSR
P
NT seq 906 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactacccgaggtcgagaccgtccgcatcggtctcgagacccatctcgtcggt
cgggtggtggcgtcgaccgaagtccttcatccgcgtgcgatccgtcgtcacctcggcggg
gaaccggatctgatcgggcggctcgccggcaaacaggtgaccggggtgcgccggcgcggc
aagtacctgtggatcgatctcgccgactccgccgaccgggcggcgctggtggtccacctc
gggatgagcggccagatgctgatcgcgcggaccgggacccccgaccacacgcatctgcgg
gttcgtgccgtcctcgacgacgagaacgaactccgcttcgtcgaccaacggaccttcggc
ggttggcatctcgacgactacaccccggatgcgtatgcgctcgagaacggcgcagcgccc
gccgacatcccgatgtcggtggcgcacatcgccaccgatcccttcgaccccgccttcgat
gccggccgggtcgtggatcgcatgcgcgccaagcactccgagatcaaacgggtcctcctg
gaccagaccgtgatctccggggtcggcaacatctacgccgacgaggcgctctggcgcgcg
cgactacacggcgcgcggatcgccgagacgatcagtcgcaagaagctgcgggagctgatc
gacgccgtcaccgaggtgatggcgtcggccctgaaggtcggcggcacgtcgttcgatgcc
ctgtacgtgaacgtcaacggacagtccgggtacttcgagcggtctctcaacgcctacggg
cgggcgggggagccgtgccgccggtgcggggcgatcatgcgcagggagcagttcatgaac
cgcagctcgttcttctgtccgcgctgccagcgaccgccgagccgcgggagtgggagcagg
ccttga

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