KEGG   Gordonia sp. KTR9: KTR9_2219
Entry
KTR9_2219         CDS       T02216                                 
Name
(GenBank) Holliday junction resolvasome, helicase subunit
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
gor  Gordonia sp. KTR9
Pathway
gor03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    KTR9_2219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gor03400]
    KTR9_2219
Enzymes [BR:gor01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KTR9_2219
DNA repair and recombination proteins [BR:gor03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KTR9_2219
    RecFOR pathway proteins
     KTR9_2219
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 Mg_chelatase IstB_IS21 nSTAND3 RNA_helicase AAA_3 AAA_14 Zeta_toxin Resolvase AAA_18 Sigma54_activ_2 TsaE
Other DBs
NCBI-ProteinID: AFR48856
UniProt: J9S3G8
Position
2518707..2519795
AA seq 362 aa
MTEDPDYVDDRDVSAMPVRSDGDLDAGLRPRSLAEFVGQPRVCEQLELVLQGAKGRGGTP
DHILLSGPPGLGKTSLAMIIASEMGAAIRVTSGPALERAGDLAAMLSNLVEGDVLFIDEI
HRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRSGSLTGPLRDRF
GFTAHMEFYEPEELVRVLRRAAAILGIELRDDASGEIARRSRGTPRIANRLLRRVRDYAE
VRGDGSITVEVARAALAVYDVDELGFDRLDRAVLDALIRAFGGGPVGVSTLAVAVGEEPA
TVEEVCEPFLVRAGMIARTPRGRVATAAAWHHLGLTPPAGAMNATFGVRPRDVAAETLFD
DL
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaccgaggacccggactacgtcgacgatcgcgacgtgagcgcgatgccggtgcggtcc
gacggtgacctcgacgccggactgcggccccggtcgctcgccgaattcgtcggccagccg
cgcgtctgcgagcaactcgaactcgtgctccagggagccaagggtcgcggcgggacaccc
gatcacatcctgttgtcgggtccgcccgggctcggcaagacgtcgctggccatgatcatc
gcctcggagatgggcgccgcgatccgcgtgacctcgggcccggcactcgagcgggccggc
gatctcgcggccatgctctccaatctcgtcgagggcgatgtgctgttcatcgacgagatc
caccgcatcgcgcggccggccgaggagatgctctacctggcgatggaggatttccgggtc
gacgtcgtggtcggcaagggcccgggtgccacctcgatcccgctggatgtcgcgccgttc
accctggtcggtgcgacgacgcggtcggggtcgctgaccggtccgctgcgcgaccgcttc
ggtttcaccgcgcacatggagttctacgagccggaggaactggtccgggtgttgcgccgg
gcggcggcgatcctcggcatcgaactgcgcgacgacgcctccggcgagatcgcccgccga
tcacgcggcaccccccgcatcgcgaaccggctgctgcgtcgggttcgggactacgccgag
gtgcgcggcgacggttcgatcaccgtggaggtcgcccgcgcggccctcgcggtctacgac
gtcgacgagctgggattcgaccggctcgaccgggccgtgctggacgccctgatccgcgcc
ttcggcggcggcccggtcggtgtgtcgacgctggccgtggcggtcggcgaggagccggcg
accgtcgaggaggtctgcgagccgttcctggtgcgtgcgggcatgatcgcccggacgcca
cgcgggcgggtggccacggcagccgcctggcatcacctcggtctcaccccgccggcaggt
gcgatgaacgccaccttcggggtgcgtccgcgcgacgtcgccgcggagacgttgttcgac
gacctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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