KEGG   Gamma proteobacterium HdN1: HDN1F_10070Help
Entry
HDN1F_10070       CDS       T01300                                 

Gene name
fadB
Definition
alpha subunit of fatty acid oxidation complex
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
gpb  Gamma proteobacterium HdN1
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:gpb00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    HDN1F_10070 (fadB)
   01212 Fatty acid metabolism
    HDN1F_10070 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    HDN1F_10070 (fadB)
   00650 Butanoate metabolism
    HDN1F_10070 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    HDN1F_10070 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    HDN1F_10070 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    HDN1F_10070 (fadB)
   00310 Lysine degradation
    HDN1F_10070 (fadB)
   00380 Tryptophan metabolism
    HDN1F_10070 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    HDN1F_10070 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    HDN1F_10070 (fadB)
   00281 Geraniol degradation
    HDN1F_10070 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    HDN1F_10070 (fadB)
Enzymes [BR:gpb01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     HDN1F_10070 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     HDN1F_10070 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     HDN1F_10070 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     HDN1F_10070 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1259371..1261518
Genome map
AA seq 715 aa AA seqDB search
MIYEGKAVSVKALEDGIVELCFDLQGESVNKFNRLTLDDLGAAAEKLGADKSIKGMIVTS
AKDVFIVGADITEFTDLFKAPEAELAGWALRANKVFCAIEDLPFPTVTAINGIALGGGLE
MCLSTDYRVMSTKAQVGLPEVKLGIFPGFGGTVRMSRIIGVDNAVEWIAAGGQHKPEKAI
KDGVVDAVVAPELLKDAAVALVKQCIDGKLDYKARRQEKLDPLKLPPMENMMAFQTCTAA
VMGQAGRNYPAPVAAVQVMQQHAAMKRDQALEVEAKGFAKVAKTSVATAMVGLFLNDQAV
KKISGKWEKQSKPVKQAAVLGAGIMGGGIAFQSASKGTPIIMKDIRDEALDLGMAEATKL
LARRVEKKKMKPADMGKTLSAIRPTLNFGDFGNVDIVVEAVVENEKIKQSVLAETEALVK
EDTILASNTSTISITRLATALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDAAVAATVA
YAKKMGKTPIVVNDCPGFLVNRVLFPYFGGFGMLLRDGADFQKVDKVMEKFGWPMGPAYL
MDVVGIDTGVHAAKVMAEGFPERMQYDYKDASEVMYENKRYGQKNGVGFYKYSKDAKGKP
KKEADPATYELIKPVVSASRDFEDQEIIDRLMIPMCLEIVRCVEEGIVSTVAEADMALIM
GIGFPPFRGGALRYIDAIGVQKFVEACDKYKALGALYQPTEKLREKAAKGESFYG
NT seq 2148 nt NT seq  +upstreamnt  +downstreamnt
atgatatatgaaggaaaagctgtctcggtcaaagcactggaagatggcatcgtagagctt
tgttttgatttgcaaggcgaatctgtcaataaattcaaccgattgactttggatgatcta
ggtgctgcggccgaaaagctcggtgcagataagtccatcaaaggtatgattgttaccagc
gccaaagacgtattcatcgtaggtgctgatatcactgagttcaccgatttgttcaaagcg
ccagaagccgagttggcagggtgggcgttaagagcgaacaaggttttttgcgcgattgaa
gatcttccattccccactgttacagcgatcaatggcatcgctcttggtggcggtttggaa
atgtgcctttctaccgactatcgggttatgtcaaccaaagctcaggtgggcctgcccgaa
gtgaagttgggaatcttcccaggctttggcggaactgtgcgcatgtctcgcattattggc
gttgataacgctgtcgagtggattgctgccggcggccaacataagcctgaaaaagcgatt
aaggatggcgttgtagatgcggttgttgcgcctgaattgctgaaagatgcggccgttgcg
ctcgtgaagcagtgcatcgacggcaagcttgattacaaagcgcgccgccaagaaaagctt
gatccgctcaagctgccacctatggaaaacatgatggcattccagacctgcaccgctgcc
gtgatggggcaagctggccgcaactaccctgcgcctgtcgctgctgtgcaagtaatgcag
caacacgcagccatgaagcgcgatcaagcgctggaagttgaagccaaaggttttgcaaaa
gttgccaaaacttctgttgcaacggcgatggttggcttattcctgaacgatcaggcagtc
aaaaaaatctctggcaagtgggaaaagcaatcgaagcctgtgaagcaagctgctgtactt
ggcgcgggaattatgggtggcggtattgccttccagtcggcaagcaaaggcacgccgatc
atcatgaaagatattcgtgatgaagcgcttgatcttggtatggctgaggctacaaaactt
ctcgcgcgacgcgttgagaagaaaaagatgaagcccgccgatatgggtaagacgctttcc
gcaattcgcccaacgctgaactttggtgatttcggtaacgtagatatcgttgttgaagcg
gtagtcgaaaacgaaaaaatcaaacagtcggtactcgccgagactgaagcgctagtcaaa
gaagacacaatcctcgcgtcgaacacgtccacaatttccatcactcgcctcgcaaccgcg
ctgaagcggccggaaaatttcgtgggcatgcacttctttaacccagttcacatgatgccg
ctggtagaagtgattcgaggtgaaaagtcgtctgatgcagcggtggctgcaacggttgct
tacgcgaagaaaatgggcaaaacaccgatcgttgttaacgattgcccaggattcttggtg
aaccgcgtgcttttcccctattttggcggctttgggatgctgctgcgcgatggtgcagac
ttccagaaagttgacaaagtcatggagaaattcggctggccgatgggccctgcgtatctg
atggacgtggttgggatcgacaccggtgtacacgctgcaaaagtgatggccgaaggcttc
ccagaacgcatgcagtacgactacaaagatgcgtctgaggtgatgtacgagaacaagcgt
tacggccagaagaacggcgtaggcttctacaagtactccaaggatgcaaagggcaagccg
aaaaaagaagcggatccagcgacctatgagctcatcaagccagtggtttctgcctcgcgc
gactttgaagatcaagagatcattgaccgattgatgatcccgatgtgcctagagattgtc
cgttgcgtggaagaaggcatcgtaagcactgtggctgaggcagatatggccttgatcatg
ggcattggtttcccaccattccgtggcggtgccttgcgttatatcgacgctattggcgtg
cagaaattcgtggaagcttgcgacaagtacaaagcacttggcgcgctgtaccaacccacc
gaaaaattgcgcgaaaaagccgctaaaggcgagtccttttacggttaa

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