KEGG   Geobacter pickeringii: GPICK_05165
Entry
GPICK_05165       CDS       T03568                                 
Name
(GenBank) ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
gpi  Geobacter pickeringii
Pathway
gpi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GPICK_05165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpi03400]
    GPICK_05165
Enzymes [BR:gpi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GPICK_05165
DNA repair and recombination proteins [BR:gpi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GPICK_05165
    RecFOR pathway proteins
     GPICK_05165
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 nSTAND3 AAA_14 AAA_24 AAA_22 AAA_3 RNA_helicase TsaE AAA_17 NTPase_1 AAA_18 AAA_2 NB-ARC AAA_25 Rad17 IstB_IS21 AAA_28 Bac_DnaA DUF815 NACHT Parvo_NS1 TetR_C_1 ABC_tran
Other DBs
NCBI-ProteinID: AJE02834
UniProt: A0A0B5BCN9
Position
1136263..1137279
AA seq 338 aa
MTRLISPEPTDEELLAESSLRPRALDDYVGQEKAKGNLRVFIDAARKRGEALDHVLLYGP
PGLGKTTLANIIACEMGVNIKSTSGPVIERPGDLAAILTNLEPHDVLFIDEIHRLSHVVE
EILYPAMEDFQLDIIIGQGPSARTIKLDLPTFTLVGATTRAGLLSSPLRDRFGVISRLEF
YTDAELGTIISRSARIMNIGIEPEGAAELARRSRGTPRIANRLLRRVRDFAQVRADGVIT
SAVVDDALALLEIDRMGFDLMDRTIMLTIIDKFGGGPVGLDTIAAAIGEERDTIEDVYEP
FLIQHGFINRTPRGRVATKAAYEHFGRVAPQSPQDTLF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaccagactcatttcacctgaaccgaccgatgaggaactcctcgccgagagttccctg
cgcccccgcgcccttgacgattacgtcgggcaggagaaggccaagggaaacctgcgggtc
ttcatcgacgcggcccgcaaacgcggcgaggccctggaccacgtcctgctctacggtccc
cccggactcggcaagacgacgcttgccaacatcatcgcctgcgagatgggggtgaacatc
aaatccacctccggcccggtcatcgagcggccgggggacctggcggcgatcctcaccaac
ctggaaccccacgacgttctcttcatcgacgagatccaccgcctctcccacgtggtggag
gagatcctctacccggccatggaggatttccagctcgacatcatcatcggccagggaccg
agcgcccggaccatcaagctcgaccttcccacgttcacccttgtgggggccaccactcgg
gcgggcctcctttcctcgccgctgcgcgaccggttcggggtcatctcgcggctcgaattc
tataccgacgccgagctcggcacgatcatcagccgctcggcccgcatcatgaacatcggc
atcgagcctgaaggggcggcggagctcgcccgtcgcagccgtgggacgccgcgcatcgcc
aaccgcctcctgcgccgcgtccgcgacttcgcccaggtgcgggccgatggagtcatcacc
tccgcggtggtggacgatgccctggcgctgctggagatcgaccggatgggattcgatctg
atggaccggaccatcatgctgacgatcatcgacaagttcggaggcggccccgtggggctc
gacaccatcgccgccgccatcggcgaagagcgcgacaccatcgaggatgtctacgagccg
ttcctcatccagcacggtttcatcaaccgcaccccccgggggcgggtggccacgaaggcc
gcctatgagcatttcggccgcgtggcgccgcaatctccccaggacaccctcttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (40)   

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