KEGG   Glaciecola psychrophila: C427_0064Help
Entry
C427_0064         CDS       T02535                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gps  Glaciecola psychrophila
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gps00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    C427_0064
Enzymes [BR:gps01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     C427_0064
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     C427_0064
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
60021..60833
Genome map
AA seq 270 aa AA seqDB search
MPELPEVEVSRLGITPHLENQVIKEIIVRKRQLRWPIPETIHQAEGLVITSIRRRAKYLL
LDTCKGSIVLHLGMSGKLCVVDCNTEVKKHDHLDIVMQNGVCLRFNDARRFGSCLWQGRN
EPILSLLASLGPEPLTDDFDGNRLYELSRSKSVAVKKFIMDNKVVVGVGNIYANESLFIA
GIDPRKAANTVTKKRYLQLAEIIKKVLASAIEQGGTTLKDFAQADGQPGYFKQQLLVYGR
AGENCDACLSPIKSVTIGQRNTFYCETCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagtcgaagtcagtcggttgggtattaccccgcatcttgaaaat
caagtcattaaagagattattgtacgtaagcgtcagttgcgctggcctattccagaaact
attcaccaagccgaaggtttagttattacttcaattcgtcgccgagcgaagtatttgtta
ttagatacctgtaaaggcagcattgttctgcatttgggcatgtcaggcaaattgtgtgtg
gtggattgcaataccgaagtgaagaagcatgatcatttggatatcgttatgcaaaatggc
gtgtgcttgcgttttaatgatgcgcgaaggtttggctcttgtttatggcaaggacgtaat
gaaccgatactaagtttattggcttcacttggcccagagccattaacggacgattttgat
ggaaataggttgtatgaattgtctcgtagtaaatctgtcgctgtaaaaaaattcataatg
gataataaagtggtggtgggggtgggcaatatttatgctaacgaatcactgtttattgcc
ggcattgaccctagaaaagctgccaacacagtgactaaaaaacgttatttgcaacttgca
gagattattaaaaaagttttggctagcgctattgagcaaggtggcacgaccctaaaagac
tttgcgcaagcagatggacaaccaggctattttaagcagcagctactggtttatggtcgt
gcgggtgaaaattgcgatgcgtgtctgtcacccatcaagtcagtcaccattgggcaacgt
aatactttctactgtgaaacctgtcagcgctaa

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