KEGG   Gossypium raimondii: 105765931
Entry
105765931         CDS       T04129                                 
Name
(RefSeq) LOW QUALITY PROTEIN: pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
gra  Gossypium raimondii
Pathway
gra00040  Pentose and glucuronate interconversions
gra01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gra00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    105765931
Enzymes [BR:gra01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     105765931
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 105765931
NCBI-ProteinID: XP_012440668
UniProt: A0A0D2QSJ2
Position
5:35729737..35731349
AA seq 434 aa
MGISSYSFFLFLFVVIIPTLEAHIAEYDEYWTARELEAIENLDKAYHSNPEEVVRHYNDH
FSRTMLEFYITKRVLAESKKGPCEVTNHVDSCWRCDPDWEKNRKKLADCAPGFARGTTGG
KDGEFYVVTDPIDNAADPKPGTLRHAVTQTGPLWITFKGSMTIKLQQELIVTSDKTIDAR
GANVEICNGAGITIQFAKNIIIHGLQIHHIIPAKGGKIKDGENHHGLRGDSDGDGVSIFG
ATNVWLDHLALHHCADGLIDVVQGSTAVTVSNCHFTDHNDVMLFGASDSYSADKKMQVTV
ALNHFGKGLVERMPRCRFGFIHVVNNDYNHWFLYAIGGTSNPTIISXGNRYSAPGFGAKE
VTCRGLLKPGQWKNWNWVSQGDHFENGAFFTPSGSPSASKQFGADKMMPFKPGQMVPELT
KYAGPLSCTIGRSC
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgggtatttctagttatagtttctttctgtttttatttgttgtcataatcccaacccta
gaagctcatatcgctgagtatgacgagtactggacggcacgagaattggaagccattgag
aacctggacaaggcctatcactccaacccggaggaggtggtccgccattacaatgaccac
ttctctagaaccatgctcgagttttatatcaccaaaagggtgttggcagaatcgaaaaag
ggtccctgtgaggttaccaaccacgttgacagttgctggagatgtgatcctgactgggaa
aagaacaggaagaagttggccgactgtgcccctggatttgctcgaggtactaccggtgga
aaggatggtgagttttacgtggtcactgaccctattgataatgctgctgaccccaagcct
ggaactctgcgtcatgctgtcacccaaactggaccactttggatcactttcaaagggtcc
atgaccatcaagctgcaacaggagctcattgttacaagtgataagaccattgatgcgagg
ggagccaatgtggaaatttgtaatggtgctggtatcactatccaatttgcaaagaatatc
attatccatggccttcaaatccatcacattattcccgccaagggtggcaagattaaggat
ggtgaaaaccaccatgggttacggggtgacagcgacggagatggggtgtctattttcgga
gcaaccaacgtttggcttgaccatcttgcccttcaccattgcgccgatggccttatcgat
gtcgttcaaggatcaactgccgttaccgtttctaactgccacttcactgaccacaacgat
gtgatgttgtttggagcaagcgactcttacagtgccgacaagaagatgcaggtcactgtt
gctttgaaccacttcggtaaaggattggtagagaggatgcctaggtgccgatttggtttt
attcatgtcgtcaacaatgactacaatcactggttcctgtatgccattggcggcaccagc
aaccctacaattatcagcncaggaaataggtattcagcgccaggctttggggctaaagag
gtgacctgtaggggcctcttaaagccgggacagtggaagaattggaattgggtatcacaa
ggtgaccacttcgagaacggtgccttttttacaccatccggtagtccaagtgccagcaag
caatttggtgccgacaaaatgatgcctttcaaacccggtcaaatggtccccgaactcaca
aagtatgctggaccattaagctgcacaatcggccgtagttgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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