KEGG   Gossypium raimondii: 105770758
Entry
105770758         CDS       T04129                                 
Name
(RefSeq) uncharacterized protein LOC105770758
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
gra  Gossypium raimondii
Pathway
gra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105770758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gra03021]
    105770758
   03019 Messenger RNA biogenesis [BR:gra03019]
    105770758
Enzymes [BR:gra01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     105770758
Transcription machinery [BR:gra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     105770758
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     105770758
SSDB
Motif
Pfam: Ssu72 PIN_9
Other DBs
NCBI-GeneID: 105770758
NCBI-ProteinID: XP_012447548
UniProt: A0A0D2TUD6
Position
5:complement(27955652..27958686)
AA seq 193 aa
MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH
MFDDLRRKDPELYKRNGILPMLKRNLSVKLAPQRWQDNAADGCFDIVFTFEEKVFDMVLE
DLHNRDQVLLKSVLVINLEVKDNHEEAAIGARIALDLCEQIEAVESWEDSIDDIMVSFEN
KHRRKLLYSISFY
NT seq 582 nt   +upstreamnt  +downstreamnt
atgaaattccgatacgccatggtttgttcatccaaccagaaccgtagcatggaggcccac
tccctcctcaagaagcagggtttcgatgtttcctcctacggaaccggggctcacgtcaaa
ctccctggtccttctctcagagaacccaacgtttacgagtttgggaccccttacaagcac
atgttcgacgacctccgccgcaaagacccagagctgtataagcggaatgggatattgccg
atgcttaaaagaaacttgagtgtcaaattggcgccccagcgttggcaagacaatgctgct
gatggttgttttgacattgttttcacttttgaagagaaggtttttgatatggttcttgaa
gatctgcacaaccgggatcaagttctcctgaaaagtgtgctggtgatcaacttagaggtt
aaagataatcacgaggaagcagccataggagctcgtattgctttagatctatgtgaacag
atcgaagctgttgagtcatgggaggattcgattgatgatattatggtttctttcgagaat
aagcaccgtaggaagctgttgtatagtatctctttctactga

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