KEGG   Gossypium raimondii: 105773080
Entry
105773080         CDS       T04129                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
gra  Gossypium raimondii
Pathway
gra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105773080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105773080
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105773080
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     105773080
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 105773080
NCBI-ProteinID: XP_052489963
Position
7:50082085..50083451
AA seq 273 aa
MSVLPKGDSVQIRKVWNDNLEEEFVLIREIVDTYNYVAMDTEFPGVVLRPVGTFKNVSDY
NYQTLKGNVDMLKLIQLGLTFSDANGNLPTCGTDNFCIWQFNFREFNISEDIFVSDSIEL
LLQCGIDFKKNNEKGIDVKRFGELLMSSGIVLNDDVHWVTFHSGYDFGYLLKLLTCRSLP
DSQTGFFKLIKLYFPMVYDIKHMMKFCNGLHGGLNKLAELLEVERVGVCHQAGSDSLLTS
CTFRKLRDNFFKSVQKYAGVLYGLEVEGGQNSD
NT seq 822 nt   +upstreamnt  +downstreamnt
atgtcggttttgcccaaaggtgattcggttcaaattcgaaaagtttggaacgataatcta
gaagaagagtttgttttgatccgtgaaattgttgatacttacaattatgttgctatggat
actgagttcccaggtgttgttctacgccccgttggaactttcaagaacgtaagtgattat
aactaccaaactttgaaaggtaatgtggatatgttgaaattgatccagttaggtctcact
ttttcggatgccaacgggaatcttcccacttgtggaaccgacaacttttgcatttggcaa
ttcaatttccgcgagtttaatatcagtgaagatatcttcgttagtgattccatcgagttg
ttgcttcagtgtgggattgattttaagaagaacaatgaaaaaggtattgatgtgaaacgg
ttcggtgagcttttgatgtcgtccgggattgtgttgaatgatgatgtgcattgggtcact
tttcatagcggatatgatttcgggtatttgcttaaactattgacctgcaggagtttgccc
gattctcaaactggcttcttcaaactgatcaaattgtattttccgatggtatacgatatc
aaacatatgatgaagttctgcaatggcctacatggtggtttaaacaagctggccgagttg
ttagaagtggaaagagttggtgtatgccatcaagctggttcggatagtttgctcacatca
tgcacatttaggaagttgagggataactttttcaaatcagtacagaaatatgcaggtgta
ctgtatggcttagaggtcgagggcgggcagaattcggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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