KEGG   Gossypium raimondii: 105773471
Entry
105773471         CDS       T04129                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC105773471
  KO
K12586  exosome complex component RRP43
Organism
gra  Gossypium raimondii
Pathway
gra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105773471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105773471
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105773471
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 105773471
NCBI-ProteinID: XP_052483192
Position
1:complement(664511..668061)
AA seq 299 aa
MGINVFFPLFRSKENRLTMGLPNASGDLSTEVEVDAFRRLFPLRFYEKHLLESIRPDARP
LGRARETTIAPGAVASANGSALAKIGSTTMLAAIKMEVMTPSLETPDEVVXVCCPIDFHM
PPICSPIVRPGRPAEAAPVVAKQLSDTILSSGMINLKELSVVSGKAAWMAYLDIYCLDAD
GALSDTALLSAVAAFSHLEIPVVSLNDDGKIVLSEEQGLSDREPVNKEKRKINLSSIPFS
LTCVLHKNYILADPTAEEESIMDTIVTVVLDSSSQLISLHKPGGTVLAYTSANGPKAWN
NT seq 900 nt   +upstreamnt  +downstreamnt
atgggtataaatgtgttttttcccctttttcgatcaaaagaaaatagattgacgatggga
ttaccaaatgcgagcggtgacttgtctactgaagttgaggtagatgctttcagacgcctc
tttccccttcgtttctacgagaaacatcttttagagtctatacgtcctgatgctcgtccg
cttggaagagcaagagaaaccaccattgcccctggggctgttgcatctgctaatggttca
gcacttgcaaaaattggttcaactactatgttggctgctatcaaaatggaggtcatgacc
ccttcattggaaacaccggatgaggttgtataggtttgctgcccgattgatttccacatg
cctccaatttgttctccaattgttaggcctggccgaccggctgaggcagcaccagtcgtg
gcaaagcaattgtcagacactattttaagctctggcatgatcaatttgaaggaactgtcc
gtggttagtggaaaagctgcttggatggcatatttggacatatactgtttggatgctgat
ggtgctctttctgacactgcattactctcagctgttgctgccttttctcatttggaaatc
ccggtggtatctctcaatgacgatggaaagatcgttttatcagaggaacaaggactatct
gacagggaaccagtcaataaggagaagagaaaaattaatctgagcagcattccgttttca
ttgacatgtgtacttcacaagaactacattttggcagatcctactgccgaggaagaatct
attatggacacgattgtaaccgtggttttagattcatctagtcaactcatctcgcttcat
aaaccaggtggaacagttctagcatatacatcagctaatggaccaaaagcttggaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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