KEGG   Gossypium raimondii: 105783089
Entry
105783089         CDS       T04129                                 
Name
(RefSeq) THO complex subunit 4D
  KO
K12881  THO complex subunit 4
Organism
gra  Gossypium raimondii
Pathway
gra03013  Nucleocytoplasmic transport
gra03015  mRNA surveillance pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105783089
  09122 Translation
   03013 Nucleocytoplasmic transport
    105783089
   03015 mRNA surveillance pathway
    105783089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105783089
   03041 Spliceosome [BR:gra03041]
    105783089
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105783089
    TREX complex
     105783089
Spliceosome [BR:gra03041]
 Complex C
  Other components
   EJC/TREX
    105783089
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105783089
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 105783089
NCBI-ProteinID: XP_012463739
UniProt: A0A0D2M9G3
Position
1:13632690..13638465
AA seq 251 aa
MPTPLDDMVNRNNTERGRPRLRPPRPGRMTLATRRGPLAVNARPSQHSITKSSHKTRSLP
WQHDLFEDSLRAAGISGVEVGTKLYVSNLDHGVTNEDIRELFSEIGELKRYSVHYDKNGR
SSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMIIEIVGANAEVPVSARINVTGTKGRKKR
TVVMTSGAGQSRSSAGINRGPNRRGGMTMRSGRGGGRGKGRGRGKRKPMEKSADDLDKEL
ENYHAEAMNVS
NT seq 756 nt   +upstreamnt  +downstreamnt
atgcctacccctctggatgatatggtaaatcgaaataataccgagagaggcagaccccgc
cttaggccgccgcgccctggaagaatgactctcgctactcgtcgaggccccctcgctgtt
aatgcccgcccatcccaacattctattactaagtcttcccacaaaaccaggagcttgcca
tggcagcatgatttgtttgaagacagccttagagctgcagggatatcaggagtagaggtt
ggcaccaagttatatgtttccaacttggatcatggagtcacaaatgaagatatcagggaa
cttttctctgagattggagagctgaaaaggtactcggttcattacgataaaaatggtcgg
tcaagtggttcagctgaagttgtttatcttagaagaagtgatgcatttgctgctcttaag
cggtacaacaatgtattgttggatggaaagcccatgataattgaaattgttggcgccaat
gcagaagtccctgtttcagctcgcattaatgtaactggaacaaagggaaggaagaagagg
actgttgttatgacgtctggagcaggtcaatcaagaagctctgctggaattaatcgtggt
cctaaccgtcgtgggggtatgactatgaggagtggccgtggaggtggtcgtggtaaaggc
cgtggccgtggaaaaaggaagcctatggaaaagtcagcagatgatcttgacaaggagctt
gagaactatcatgctgaggccatgaacgtttcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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