KEGG   Gossypium raimondii: 105791035
Entry
105791035         CDS       T04129                                 
Name
(RefSeq) ubiquitin C-terminal hydrolase 22 isoform X1
  KO
K11366  ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gra01002]
    105791035
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gra03021]
    105791035
   04121 Ubiquitin system [BR:gra04121]
    105791035
   03036 Chromosome and associated proteins [BR:gra03036]
    105791035
Enzymes [BR:gra01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     105791035
Peptidases and inhibitors [BR:gra01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   105791035
Transcription machinery [BR:gra03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     105791035
Ubiquitin system [BR:gra04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    105791035
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     105791035
    SLIK complex
     105791035
SSDB
Motif
Pfam: UCH UCH_1 zf-UBP
Other DBs
NCBI-GeneID: 105791035
NCBI-ProteinID: XP_012474355
UniProt: A0A0D2R2F9
Position
8:complement(22249357..22255739)
AA seq 587 aa
MSSKINGHVSPQPCPHLLVFRSRNGPKPFRALQDCIRVKPPGGRAAIRREPTEVPRCGTC
EESSRSRLYACVACAAVFCHAPLLHSHASDHSLSIPGHEIAVDVDRAELFCCACGDQVYD
RDFDAAVVLAQTVNATATTSTSGSTAMQCSVAGSQPENLRKRRRVDYRPWEPDSGEHISR
GNQSIPLLDATNASLVSSTQQPWGFRGLNNLGNTCFMNSILQALLHTPPLRNYFLGDRHN
RYYCQQKNGAINGTKNSRLCLACDMDALFSAVFSGDRTPYSPAKFLYSWWQHAANLASYE
QQDAHEFFISMLEGIHEKVEKDKRKSQSPAGSGDCCIAHRVFSGILRSDVMCMVCGFTST
TYDPCVDISLDLEPNQGGSGKSSSAKSLNSFNFEADCMRPNQNCGISTLKGCLERFTRAE
KLGSDQKLFCQKCQVRQESLKQMSIRKLPLVSCFHVKRFEHSSIRKMSRKVDRYLQFPFS
LDMAPYLSSSILRSRFGNRIFPFDGDEQDASNDLSTEFELFAVVTHSGRLDAGHYVTYLR
LSNQWYKCDDAWITQVNESIVRAAQGYMMFYVQKVLYYKESENQGTS
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgtcttccaagatcaacggccacgtttcgcctcagccgtgtcctcacctcctcgtcttc
cgttcccgcaacggccccaagccctttcgcgccctacaggattgtatccgcgtcaagccg
cccggcggtcgcgccgccataaggagggaacctactgaggtcccacgatgcggcacgtgc
gaggaatcttcccgttcgagactctacgcgtgcgtcgcatgtgccgcagtgttctgccac
gcgcctcttcttcactcccacgcgtctgatcactcgctttccatccccggtcatgagatc
gccgttgacgtcgacagagctgagctattttgctgtgcgtgcggtgaccaggtatacgat
cgcgacttcgacgctgccgtcgtcctcgcacagactgtcaacgctaccgcaaccacctcc
acttccggatccaccgcaatgcagtgcagcgttgctggatctcaaccggagaatctacga
aagcgccgtcgagtagattatcgtccgtgggagccagattcaggagaacacatttccagg
ggaaatcagtcgatccctcttctggacgcgacgaatgcctcattggtttcgtcaacacaa
caaccttggggatttcgtggattgaataatttggggaatacctgctttatgaattcaata
ttacaagcgttgctccatacgccgccgttgcgaaactatttcttaggcgatcgacacaat
agatattattgtcagcaaaaaaatggtgctattaatggcactaaaaattcaagattgtgt
ttggcttgtgacatggacgcgctattctcggctgttttctcgggggatcggactccttat
agtccagctaagttcttgtacagttggtggcaacatgcggcaaatttggctagttatgag
cagcaggatgcccatgaatttttcatttccatgcttgagggaattcatgaaaaggtggag
aaagataaaaggaagtcccaaagtccagcaggcagtggagattgttgcattgcacataga
gtattttctggtattttgaggtcggatgtcatgtgtatggtttgtggtttcacatccaca
acatatgacccatgtgtagacatctccctggacttggaaccaaaccaaggaggttctggg
aagtcttcatctgcaaaatcccttaattctttcaattttgaggcagactgcatgcgtccg
aatcaaaactgtgggatatctaccttaaagggttgcttagaacgatttacgagagctgaa
aagttggggtctgaccagaaacttttctgccaaaagtgtcaggtgaggcaagagtccctt
aagcagatgtccataagaaagcttcccctggtttcatgctttcatgttaaaagatttgaa
cattcatcaatacgaaagatgtcaaggaaggttgacaggtatctgcagttcccattttca
ttggacatggctccttatctttcttcttccattttgaggagtcgatttggaaacaggatt
tttccttttgatggagatgaacaagatgcatccaatgacttgtcaactgaatttgagttg
tttgctgttgtgacgcactcaggcagattagatgccggccattacgtgacttatttgcga
ttaagtaaccaatggtacaagtgtgatgatgcatggattactcaagttaatgagagcatc
gtgagagctgcacaaggatacatgatgttttatgtacagaaggtgctatattataaagaa
agtgaaaaccaaggcacatcatga

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Ontology (6)   
   KEGG BRITE (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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