KEGG   Gossypium raimondii: 105800079
Entry
105800079         CDS       T04129                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
gra  Gossypium raimondii
Pathway
gra04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:gra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105800079
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gra01002]
    105800079
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gra04131]
    105800079
   04121 Ubiquitin system [BR:gra04121]
    105800079
Enzymes [BR:gra01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     105800079
Peptidases and inhibitors [BR:gra01002]
 Metallo peptidases
  Family M67
   105800079
Membrane trafficking [BR:gra04131]
 Endosome - Lysosome transport
  Others
   Others
    105800079
Ubiquitin system [BR:gra04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    105800079
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB
Other DBs
NCBI-GeneID: 105800079
NCBI-ProteinID: XP_012486432
UniProt: A0A0D2QD69
Position
9:complement(43980662..43987688)
AA seq 502 aa
MRSSTERINIAASAQKLDVDNRIPLRYYYRIADNILKQADIFRAEKNIIDLYIMLLRFSS
LVSETIPCHRDYGTSLKYQKVYLKKRLVNALTELEDLKPQVQQKINELNRIYTYQSTSLE
QSAVKNQHLTYYGVTKAVRPAARELGYYGLRTPQLSYSNPMEEQFRRMSLNLLRPKEETL
SKHSFLGPNGLYGQWQPPRSDKGVKYPSNVDLTPVEFPSLQRPIENELPGKNDHSNSEPE
ASSMESILSVDNYVNSEKSHADEPCPMISFEESETAPVHNNVTRQLSPPPVLAEVQDLVH
ATQASKTDCTVENPSVDGLVHSESPLELHIATTMMESFMKLAKSNTDRNLETCGVLAGSL
KNRKFYVTALIIPKQESTSNSCQTTNEEEIFEVQDKKSLFPLGWIHTHPTQSCFMSSIDL
HTHYSYQIMLPEAVAIVMAPTDSSRKRGIFRLTTPGGMSVIRQCQQRGFHPHNPPPDGGS
VYNTCTDVYMNPSVKFDVIDLR
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgaggtcttcgacggagagaataaacatagctgcgagtgcgcaaaaacttgatgttgat
aatcggatccctctccgctattattaccggatcgccgataatattctcaaacaggctgat
atatttcgagctgagaagaatattatagatctatatatcatgcttctaagattttcaagt
ttggtttctgaaacaataccttgccatcgggattatggaacgtctctaaaatatcaaaag
gtttacttgaaaaagaggctagtgaatgccttgactgagctagaggatttgaagccacag
gtgcaacaaaagatcaatgaattaaacagaatatatacttatcaaagtacttcattagag
cagtctgctgtgaaaaaccaacatttgacatactatggtgtgacaaaggcagtcagacca
gctgcacgagaacttggttattatggtttaagaactccgcaactttcatattccaaccca
atggaagagcagtttcggagaatgtcattaaacctgttgcgtccgaaggaggaaaccctc
tccaaacattcttttttgggtccaaatgggctttatgggcagtggcagccacctaggagt
gataaaggggtcaaatatccaagcaatgttgacctgactccagttgaattcccaagtttg
cagcggcctatagaaaatgaacttccagggaagaatgatcatagcaactcggagcctgaa
gcatctagcatggaatcaattctcagtgttgataattatgtgaatagtgagaaaagtcac
gcagatgaaccttgtccgatgatttcttttgaagaatcagaaactgctcctgttcataat
aatgttaccagacagctatcacctcctcctgtacttgcagaagtacaagatttggttcat
gctacccaggcctccaagacagattgtacagtagagaatccctctgtagatggtcttgtt
cattctgaatctcctctagagttgcacattgcaaccacaatgatggaaagcttcatgaag
ctggctaaatcaaatactgataggaatttagaaacttgtggtgttcttgcaggttccctt
aaaaatagaaagttctatgttacagctcttattatcccgaagcaggaatcaacatctaac
tcgtgccagacaacaaatgaggaggaaatatttgaagtgcaggataagaaatctctcttc
cccctgggttggattcatacgcatcctactcagtcatgtttcatgtcatcaattgatctt
catacacactactcataccagattatgttgccagaagctgtggcgatagtaatggcgcca
acagatagttcaagaaaacgtgggatttttcgtttgacgactcctggtggcatgtcagtc
atcagacagtgccagcaacgtggctttcatccacacaatccacctcctgatgggggctcc
gtctataatacctgtacagatgtgtatatgaatccgagtgtgaagtttgatgtcatagat
cttcgatga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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