KEGG   Christiangramia salexigens: LPB144_07105
Entry
LPB144_07105      CDS       T04586                                 
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
grl  Christiangramia salexigens
Brite
KEGG Orthology (KO) [BR:grl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:grl03016]
    LPB144_07105
Enzymes [BR:grl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     LPB144_07105
Transfer RNA biogenesis [BR:grl03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LPB144_07105
 Prokaryotic type
    LPB144_07105
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344 PSP1 PnpCD_PnpD_N
Other DBs
NCBI-ProteinID: APG60192
UniProt: A0A1L3J503
Position
complement(1550779..1551525)
AA seq 248 aa
MRYFVELSYFGKAYHGWQNQPQSISVQEVLEDRLSKVFRRKMDIVGAGRTDAGVHAKQMY
AHFDVEDEFDVEELKYKLNSMLPKDIAIAGFFKVPDDAHARFDAMARSYEYHILIEKDAF
SQDFAWYARPQLDVEKMNKAALVLLEYTDFKSFSKSRTDVKTYNCKISHAEWKIDGNKIV
FYITADRFLRNMVRAVVGTLVEIGKGKYPVSRMHDVIKSKDRGEAGASVPAQGLYLTRIV
YPNNIRLD
NT seq 747 nt   +upstreamnt  +downstreamnt
ttgaggtattttgtagaactctcatattttggaaaagcttatcatggatggcaaaatcag
ccacaatccataagtgttcaggaagttctggaagataggttgagcaaggtgttccgaaga
aagatggatattgtaggagcagggagaactgatgcaggtgtgcacgccaaacaaatgtat
gcacactttgatgtagaggacgaatttgatgttgaggaacttaagtataaacttaactcc
atgcttccaaaggatatcgcaattgccggcttttttaaagttcctgatgatgcccatgca
agatttgatgctatggcccgtagttatgaatatcatattcttattgaaaaggacgctttt
tctcaggattttgcttggtatgcaaggcctcagctcgatgtggagaaaatgaataaggcg
gctctggttctattggaatataccgattttaagagcttttcaaaaagccgtaccgatgtg
aaaacgtataactgcaagatctcccatgcagaatggaaaatagatggaaataagatcgtt
ttttatataactgcagacaggtttttacgaaatatggtaagagcggtagtgggaactctg
gtagaaataggaaaaggcaagtatcccgtatctcgcatgcatgatgtgatcaagagtaag
gataggggtgaagccggagcatctgttcctgcacagggattatatttaacaaggatcgtg
tatccaaacaatattagattagactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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