KEGG   Geobacillus stearothermophilus: GT50_09985
Entry
GT50_09985        CDS       T04043                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
gse  Geobacillus stearothermophilus
Pathway
gse03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GT50_09985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gse03021]
    GT50_09985
   03400 DNA repair and recombination proteins [BR:gse03400]
    GT50_09985
Enzymes [BR:gse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GT50_09985
Transcription machinery [BR:gse03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GT50_09985
DNA repair and recombination proteins [BR:gse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GT50_09985
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 Peptidase_M23 Apocytochr_F_C RPOC_hybrid
Other DBs
NCBI-ProteinID: ALA70486
UniProt: A0A9W3R4H9
Position
1884148..1887747
AA seq 1199 aa
MLDVNKFEYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGDTPLEKKQLLSEKEYRAYREKYGQSFQASMGAEAIKKLLQ
DIDLDKEVAALKEELKTAQGQRRARIIKRLEVLEAFRSSGNDPAWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKKGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVERGLAHNIKSAKRKIERVHPEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEREGAIGEGMVFKDTDEALLAYHNGYVHLHSRIAIH
AGSLKNETFTEEQNNKLLLTTVGKLIFNEILPNSFPYINEPTTENIEGRTPDKYFLDKGV
NVREEIRKRELVPPFKKKVLGQIIAEVFKRFKITETSKMLDRMKDLGFQYSTKAGITIGV
ADIVVLPEKQEILDEAQAKVDTVLKQFRRGLITDEERYERVISIWSAAKDKIQDRLMKSL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGILARALTDGTEVVVKLE
ERLVGRYAHKTVRHPETGEVIVRKDEMITEDIANEIIKAGITEVWIRSVFACNTRHGVCK
KCYGRNMATGMDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQELF
EARNPKGQAVISEIDGTVISINETRDNQYEIVVQSEVETRTYVAPYNARLKVEEGQRVER
GQELTEGSVDPKQLLRVRDITSVQEYLLREVQKVYRMQGVEISDKHIEVMVRQMLRKVRV
IDAGDTDVLPGTLLDVHQFTDVNAKALREGKRPATARQVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMARYRKVKPAVKKETAGGTVSSK
NT seq 3600 nt   +upstreamnt  +downstreamnt
ttgctagatgtcaataagtttgagtacatgaaaattgggctcgcttccccggagaaaatt
cgttcttggtcgtatggcgaagtcaaaaagccggagacaatcaactatcggacgttaaag
ccggaaaaagacggcttgttttgcgagcgcattttcggtccgacgaaagactgggaatgc
cattgcggcaaatataaacgcgttcgctacaaaggcgtcgtctgcgaccgctgcggcgtc
gaagtgacgcgctcgaaagtccgccgcgaacggatgggccatatcgagctggctgccccc
gtttcgcacatctggtatttcaaaggcatcccgagccggatggggttggttcttgacatg
tcgccgcgggcgctcgaagaggtcatttattttgcatcctatgtcgtcaccgacccgggt
gatacgccgcttgagaaaaagcagctgttgtcggaaaaggaataccgcgcctatcgcgag
aagtacggtcaatcgttccaagcgtcgatgggggcggaggcgatcaaaaagctgctccaa
gacattgatttggataaagaggtggccgcgctgaaagaagagctgaaaacggcgcaaggg
caacggcgcgcccgcatcattaagcggcttgaagtgcttgaagcgttccgcagttcaggg
aacgacccggcatggatggtgcttgatgtactgccggtcattccgccggagttgcgcccg
atggttcagcttgacggcgggcggtttgcaacatcggatttgaacgatttgtaccgccgc
gtcatcaaccgtaacaaccggctgaaacggctgcttgatctcggtgcgccgaacattatc
gtccaaaatgagaagcggatgctgcaagaggcggttgatgctttgatcgataacggccgc
cgcggccgtccggtgaccggtccggggaaccgtccgttaaaatcgctttctcatatgctg
aaagggaagaaagggcgcttccggcaaaacttgctcggcaaacgcgttgattattccggc
cgctccgtcatcgtcgtcggcccaaacttaaaaatgtatcaatgcgggctgccgaaagaa
atggcgctagagttgttcaagccgttcgtcatgaaggagcttgtggagcgggggttggcg
cataacattaaaagcgcgaaacggaaaatcgagcgcgtccatccggaagtgtgggatgtg
cttgaagatgtcatcaaagaacatccggtgctgttaaaccgcgctccgacgctgcaccgt
ctcggcattcaggcgtttgaaccaacgcttgtggaagggcgggcgatccgtcttcatccg
cttgtttgcacggcgtacaacgctgactttgacggcgaccaaatggcggtgcacgtgccg
ctgtcagctgaggcgcaagccgaagcgcgcttgttgatgttggcggcgcaaaacattttg
aacccgaaagatgggaagccggtcgtgacaccatcacaagacatggtgttgggcaactac
tacttgacgatggagcgcgagggagccatcggcgaaggcatggtgttcaaagacacggac
gaggcgctgcttgcttaccataacggctacgtccatctccattcgcgcatcgccattcat
gccggttcgctgaaaaatgaaacgtttaccgaagagcaaaacaacaagttgctcttaacg
accgtcggaaagctcattttcaacgaaattttgccgaattcgttcccgtacatcaacgag
ccgacgacggaaaacattgaagggcggacgccggacaagtacttccttgacaaaggggtc
aacgtgcgcgaagaaattcgcaagcgcgaactcgtgccgccgtttaagaaaaaagtgctc
gggcaaattatcgctgaagtgttcaaacggttcaaaatcaccgaaacatcgaagatgctc
gaccgcatgaaagaccttggcttccaatattcgacgaaggccggcatcacgatcggcgtg
gccgatatcgtcgtcctgccggaaaaacaagaaattttggatgaagcgcaagcgaaagtc
gatacggttttgaagcagttccgccgcggcttaattacggacgaagagcggtacgagcgc
gtcatctccatctggagcgcggcgaaagacaaaattcaagaccggttgatgaagtcgctt
gataaacgcaacccgatctttatgatgagcgattccggagcgcgcgggaacgcgtcgaac
tttacgcagcttgcggggatgcgtggtttgatggccaacccggccggccggatcattgag
ctgccgatcaagtcgtcgttccgcgaaggcttgacggtattggaatactttatctcgacg
cacggcgcgcgaaaaggattggcggatacggcgctcaaaacggccgactcaggctatctc
acgcgccgccttgtcgacgtggcccaagacgtcatcgtccgcgaagaagattgcggcacc
gaccgcggcattttggcgcgggcgctgacggatggcacggaagttgtcgtcaagcttgaa
gagcggcttgtcggccgctatgcgcacaaaacggtgcgccatccggaaacgggcgaagtg
atcgtccgcaaagacgagatgatcaccgaagatatcgccaatgagatcattaaagccggc
attacggaagtatggattcgctccgtattcgcctgcaacacgcgccatggcgtctgcaaa
aaatgttacggccgcaacatggcgaccggcatggacgtcgaagttggcgaagccgtcggc
attatcgccgctcagtcgatcggcgagccgggcacgcagctgacaatgcggacgttccat
acaggcggcgtcgccggcgacgatatcactcaaggtttgccacgggtgcaagagctgttt
gaagcgcgcaacccgaaagggcaagcggtcatttctgaaatcgacggcacggttatttcg
attaatgaaacgcgcgacaaccaatatgaaatcgtcgtgcaaagcgaggtcgaaacgcgt
acgtatgtagcgccgtacaacgcgcggctgaaagtcgaagaaggtcagcgcgtcgaacga
ggccaagagctgacagaaggctcggtcgacccgaaacagttgctgcgcgtgcgcgatatt
acatccgttcaagagtacttgcttcgtgaagtgcaaaaagtgtaccggatgcaaggggtg
gagatcagcgacaagcatatcgaggtcatggtgcggcaaatgctgcgcaaagtgcgcgtc
atcgatgccggcgacaccgatgtgctgccgggtacgcttttggatgtccaccagtttacg
gatgtcaacgccaaagctcttcgcgaagggaaacggccggcaacggcccgccaggtgttg
ctcggcatcacgaaagcgtcgcttgagacggattcattcttgtctgctgcttcgttccaa
gaaacgacgcgcgtcttgaccgatgcagcgatcaaaggaaaacgtgatgaattgcttggc
ttaaaagaaaacgtcattatcggcaaactcgtcccggctggaaccggtatggcccgctac
cggaaagtgaagccggccgtcaaaaaggaaacggctggcggcacggtgtcgtccaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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