KEGG   Galdieria sulphuraria: Gasu_14190
Entry
Gasu_14190        CDS       T02926                                 
Name
(RefSeq) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
gsl  Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsl03032]
    Gasu_14190
   03400 DNA repair and recombination proteins [BR:gsl03400]
    Gasu_14190
Enzymes [BR:gsl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Gasu_14190
DNA replication proteins [BR:gsl03032]
 Prokaryotic type
  DNA Topoisomerases
   Gasu_14190
DNA repair and recombination proteins [BR:gsl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Gasu_14190
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 UxaE Toprim_2 PS_pyruv_trans
Other DBs
NCBI-GeneID: 17090103
NCBI-ProteinID: XP_005707982
UniProt: M2XMQ1
Position
Unknown
AA seq 947 aa
MSYHTFRVFCFTCLHRHYVVHTKPFDVYVIAKRFSKASLQFSSSRSLSLGIPRRKFSLQH
SKHLPFIQTLEASQTREKSGRHSEKKKTERKKAKSSPTKEKKKESVGLVIVESPAKAKTI
QKFLPERYIVDSCMGHIRNLPESAKEIPDELKKLPWARLGVNVENNFEPIYTISKDKSKV
VDHLKELVNSCDELILATDEDREGEAIAWHLVQVLQPKVPYKRAVFHEITKEAIIESFEN
LRDVHMNLVHAQEARRILDRLVGFTLSPILWKKIAPRLSAGRVQSVALAMIVQRELERIT
FRQSSFYNIVAKLALSPQYEINEMKEGLTAWLLAFNGKRLATGKDFDPTTGDLKKESIEE
GIIHMDLQFAENLLERMMESGVTWKVKSVEKRKLSRKAPVPFITSTLQQESSRRLGFTAG
ETMRLAQDLYEQGFITYMRTDSPTLSNQAKIAAQKCIVEQFGRDFLQDAASSNNSPKVSK
LAQEAHEAIRPAGTSFLSPVQVVNQVSPKHQKLYELIYRRTLASQMKNAEFFVTSVNIDS
ILEDGSIATFHTSGRTLVFEGYLKAFNEVYGIEENFDDLDDSPLSMHNKNLPALHEGQEL
YSFHLEPIMHSTKPPPRYTEAALIKALEAEGVGRPSTYASILETLVERKYVHRERSKGKS
RTSLVPCLSAVSVVNLLNKHFPEVTDPQFTASMEEALDNIANGKADHIEYLRSYFLGEYG
LQEKAKEKEKNIDSQEVRILSLPIRHENANESVQVKVGPYGPYIELIGNSTKKLNILNEM
SPEELCSKTIQELVEERKGKFLGYDPESGHALFLKKGRFGWFLQLVEDNLSPESEGELEM
EEEAQKRRVIKNVRLPANVNVESLDLANGLKWLSLPRVLGIDPHTGKEVVASVGPFGPYV
GCDGKYISLKSGMASVFEIDLKTAVELISNPVTYQNRKKGNGSKRQY
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgtcatatcacacctttcgggtattctgtttcacctgtttgcatagacactatgtcgtt
catacaaaaccttttgatgtctatgtcatagcaaaacgtttttccaaagcttctcttcag
ttttcgtcaagtcgttctttgtcgttgggtatacctcgtcgaaagttctctttgcagcac
tccaagcatttaccgtttattcaaactctcgaagcaagtcaaacgagagaaaagagtggt
agacattccgaaaagaaaaaaactgaaaggaaaaaagcgaagtcgtcacccaccaaggaa
aagaaaaaagagtcggtgggactagtgatagttgaatcgcctgcaaaggcaaagactatt
caaaagtttctaccggagagatacattgtggactcttgtatgggtcatattagaaactta
ccagagtcagcaaaggaaatacctgatgaacttaagaaacttccttgggctcgcttaggg
gtgaacgtggaaaataattttgaacctatatacacaatttcaaaagataaaagtaaagtt
gtcgatcacttgaaggaattggttaactcttgtgacgagttgatacttgcgactgatgaa
gaccgcgaaggagaagcgattgcatggcatctcgttcaagtattgcaaccgaaagtacct
tacaaacgagctgtgttccatgaaataaccaaagaggcgataattgaatcttttgagaac
ttacgcgatgtgcatatgaatctcgttcacgctcaggaagcgagacgtattctcgatcgc
ctggttgggtttactctatctcctattttatggaaaaaaattgctccaagactttcggct
ggtagagttcaaagtgttgcattagctatgattgttcaaagagaactggaacgaataaca
tttcgtcaaagttctttctataatattgtagcaaaacttgcgctgtctccacagtatgaa
atcaatgaaatgaaagaagggttaacggcatggctgttggcgttcaatggcaagcggctt
gcaactggaaaagacttcgatcctaccactggagatctgaagaaggaaagcatagaagaa
ggtatcattcatatggacctgcaatttgctgagaatcttttagaaagaatgatggaaagc
ggtgtaacttggaaagtaaaatctgttgaaaaacggaaactcagtcgaaaagcccctgta
cccttcattacatccacacttcaacaagaatctagtcgtcgtcttggttttacagcagga
gagaccatgcgtttggcacaagatttgtatgaacaaggattcattacctacatgagaacg
gatagtccaactctttctaatcaagccaaaattgctgcacaaaaatgtatcgtagaacag
tttggtagagattttcttcaagatgctgcatcgagcaacaactcgccaaaggtatcgaag
ttagcccaggaagcacatgaagcaatcagacccgcgggaaccagttttctttctcccgtc
caagtggtcaatcaagtaagccctaagcatcagaagctttatgaacttatctaccgtcgt
acattggcatctcaaatgaagaatgcagaattttttgtaacaagtgtgaatatcgattct
attttagaagatggaagtattgcaacttttcatacttccggtagaaccctcgtatttgaa
ggttatttgaaagcatttaatgaagtttatggaatagaggaaaattttgatgacttggac
gatagtcctttgtctatgcataataagaatctaccagcgttacatgaaggacaggaattg
tattcgtttcacttggaacctattatgcactccacgaaaccgccaccacgatatacggaa
gctgcattgattaaagcattagaagcagaaggagttggacgaccaagtacatatgcatct
attctggaaactttggtagaaaggaaatatgttcatcgcgaaagaagtaagggaaagtca
cgtactagtctcgttccatgtctttctgcagtttctgtagtcaacctattgaataagcac
tttcctgaagtgacggatcctcaattcactgcttcgatggaggaggcattggataatata
gctaatggaaaagcagatcatattgaatatttgcgctcctactttttgggagaatatggt
cttcaagaaaaggccaaagaaaaagagaagaatattgatagtcaggaggtccgtatactt
agtcttcccatccgacatgaaaatgcaaatgaaagtgtccaagtaaaggtgggtccctat
ggtccgtatatagaattgataggaaattcaacaaagaaactaaatattttgaatgaaatg
tctccggaagagttatgctccaaaaccatccaagaacttgtcgaagaaagaaaaggaaaa
tttctcggttatgaccctgaaagtggtcatgcacttttcttaaagaaaggccggtttggt
tggtttctgcagttggttgaggataacttatcaccagagagtgagggggagttggaaatg
gaggaagaagctcaaaagagacgagtaataaaaaatgttcgtttgcctgctaatgtaaat
gttgagtcgttagatttggcgaatggcttgaaatggttatcattaccaagagttcttggg
atagaccctcacacgggtaaagaagttgttgccagtgttggtccttttggtccttatgtt
ggatgtgatgggaaatatattagtttgaagtcaggtatggcatccgtatttgagattgac
ttgaagactgctgtagaattgatatcaaatcccgtaacatatcagaatcgaaagaaaggc
aatggttctaaacgacaatattaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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