KEGG   Galdieria sulphuraria: Gasu_28370
Entry
Gasu_28370        CDS       T02926                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Gasu_28370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsl03019]
    Gasu_28370
Messenger RNA biogenesis [BR:gsl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Gasu_28370
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     Gasu_28370
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 17088606
NCBI-ProteinID: XP_005706357
UniProt: M2XIE0
Position
Unknown
AA seq 249 aa
MPREELISPDGLRTDGRRPLEIRKVTCRMGILPRADGSCHLEMGNTIVLATVYGPRELSS
RQSSCGIIRCEYSMASFASTDRRRGKRSDRNSVEMASSIKKTFENVLLTDLFPKSRVDIF
IQVLQADGSERSAAINAVTIAMVNAGIPMKDLIVSCSAGYMENTTVMDLNHVEMITRGPQ
LTLAIYASTERMATAHLESKASFEIFENLIAIAKKGCLQMFDVMHSSIERYSLNLIASRD
HIATFGSRA
NT seq 750 nt   +upstreamnt  +downstreamnt
atgccacgtgaagaactcatttcaccagatggtttaagaactgatggaagacgcccttta
gagataagaaaagtaacctgtcgaatgggtattttgcctcgtgcagacggaagttgtcac
ttggaaatgggaaatacgattgttttggcaaccgtatacgggcctcgtgagttgtcttca
cgtcagtcttcgtgtggaatcatccgctgtgaatacagtatggcatcttttgcgtccacc
gacagacgaagagggaagagaagtgacagaaatagtgttgaaatggcttcttccattaag
aagacctttgagaatgtattgttgaccgatttatttcccaagtctcgtgtcgatatcttc
attcaagtgttgcaagcagatggaagtgaacgcagtgctgcgataaatgccgttactata
gcaatggtgaatgcgggaatacctatgaaggacttgattgtttcgtgctcagccggatat
atggagaataccactgtgatggacttgaatcatgtagaaatgataacgagaggcccacaa
cttactcttgctatctacgcaagtaccgaaagaatggcaactgctcatttggaatcaaaa
gcatcttttgaaatctttgagaatttgattgcaattgctaagaaaggatgtttacaaatg
ttcgatgtgatgcattctagtattgaaagatattccttgaacttgatcgcttctcgtgat
catattgcaacatttggttcgagggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system