KEGG   Galdieria sulphuraria: Gasu_28920Help
Entry
Gasu_28920        CDS       T02926                                 

Definition
formamidopyrimidine-DNA glycosylase isoform 1 (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gsl  Galdieria sulphuraria
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gsl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Gasu_28920
Enzymes [BR:gsl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Gasu_28920
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Gasu_28920
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
Unknown
AA seq 389 aa AA seqDB search
MPELIQVEYFRQFIQEHLSLDTAVVENIYFSQDASSLFPKGHISMETIPIQVVHKKVIRV
QRYGKYLWLELSSPVVYIIFHFGMSGSLAHRKTDGSLEFAHVGKHYSSLIQEWPSQYAKL
RLVFQDGSELAFLETRKWGKVVFTEQSPMQLSYITCLGFDPILSNPTIQELYDKIQSYKS
AIKTVLLNGSVIAGIGNWMADEILYKSKIHPLEWACLLSLNDVESLWEATKQVVQQGVRV
RANSDEFPKDWLFHLRWKKDKAQLGQQKGVKILQVGGRTTLYVASQQRLHKPGRMDSIKD
KVGSSPQDSKTKQQPSEKQMRDIYRCLCISEKDGINQQDLCNAVKELESGKWEDDQVIKD
AIALFSSNGYSVSWEDFVNIYKQIQSTSK
NT seq 1170 nt NT seq  +upstreamnt  +downstreamnt
atgccagagttgatacaagttgaatatttccgacagtttattcaagaacatttatctttg
gatacggctgttgttgaaaatatttacttttcacaagatgccagtagtttgttcccaaag
gggcatatatctatggaaactattccaatacaagtggttcataagaaagtgattcgagtg
caacggtatggaaaatacctttggttggagttgtctagtcccgttgtatatattatattc
cactttggtatgtcaggtagtttggctcataggaaaacggatggtagtctagagtttgcc
catgttggaaaacattactcgtcgttgatacaagagtggcccagtcagtatgcaaagtta
aggttggtattccaagatggttccgagttggcctttttggaaactagaaaatgggggaaa
gtcgtatttactgaacaaagtcctatgcaactatcatatatcacttgtttgggattcgat
ccaatcttatccaaccccactattcaggaattgtatgataagatacaatcatacaaaagt
gctataaagacagtgttactgaatggtagtgttattgctggtatcggtaattggatggca
gatgagattctatacaagtccaaaattcatcctttagaatgggcttgtttattatctttg
aatgatgttgagtctttatgggaagcaactaagcaagtcgtacaacaaggcgttcgagta
cgtgccaatagtgatgagtttcccaaggattggttatttcatcttcgttggaaaaaggat
aaagctcaactgggtcaacaaaagggagtcaagatactgcaagtgggaggaagaaccaca
ttgtatgttgcttctcaacaacgtttgcataaaccaggaagaatggattccatcaaagat
aaagtaggatcaagtccacaggattccaagacaaaacagcaaccatccgagaaacagatg
agagatatttatcgttgtttatgtatttctgaaaaagatggcatcaatcaacaagacttg
tgtaatgcagtgaaggaactggaaagtggaaaatgggaagatgatcaagtgatcaaggat
gccattgctttgttttcttcgaatggctattccgttagttgggaagactttgtaaatata
tataaacaaattcagagcacttcaaagtga

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