KEGG   Geobacillus subterraneus: GS3922_04820
Entry
GS3922_04820      CDS       T04323                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
gsr  Geobacillus subterraneus
Pathway
gsr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GS3922_04820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsr03019]
    GS3922_04820
   03400 DNA repair and recombination proteins [BR:gsr03400]
    GS3922_04820
Enzymes [BR:gsr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GS3922_04820
Messenger RNA biogenesis [BR:gsr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GS3922_04820
DNA repair and recombination proteins [BR:gsr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GS3922_04820
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII VHL_C
Other DBs
NCBI-ProteinID: AMX83065
UniProt: A0A146D0V6
Position
975850..977373
AA seq 507 aa
MDELIKILHARFGHASFRPGQREVVEDVLAGRDVLAMLPTGSGKSLCYQLPVYLLPGSVL
IVSPLVSLMEDQVEQLRRRGEKRVIAFHSLLDAEEKWQALASLPDFRFIYASPEMLQSAK
FLAALGRARISLFVVDEAHCISQWGYDFRPDFLKLGAVRRALGSPPCLALTATAPPEVRD
DIVRTLGMERARLHIYSVDRPNIALKVEHCLSAEEKAARLVEYAGRLEGPGIVYFSSRQW
AEEMARRLEGSGAGRVAYYHAGMDGEQRLLVQQQFLYGQLDIVCCTSAFGMGVNKENVRF
VLHFHMPAQLEAYVQEIGRAGRDGAPSLAVLFYADGDRAIAQAVAEAELPDPHELREWCR
RLPEDAAADQWKAAIEASGFTDIQKRLVAYCLEWGQTAASERITAEAKEQLYERMAAAME
ARRRWKRKKLQEMDDWVHTSSCRRAAIVRAFGEELTDKPDVCCDGCGLRLDAYMRAARHP
AAAPIGHWREELWRMFFSGGRQDEAAK
NT seq 1524 nt   +upstreamnt  +downstreamnt
ttggatgaattaataaaaatcttgcatgcgcggtttggacatgcctcattccgcccaggg
cagcgggaagtggtcgaagacgtgctcgccggacgcgacgtgttggcgatgttgccgacc
ggaagcggcaagtcgctttgctaccagctgccggtgtatttgctccccggaagcgtgctt
atcgtttcgccgcttgtctcgctcatggaagatcaagtcgaacagctgcgccgacgcggg
gaaaagcgggtgattgctttccatagcttgctcgatgcggaagaaaaatggcaggcgctc
gcctcgctgcccgattttcgtttcatttacgcttcgccggaaatgctgcaatcggctaaa
tttttggcggcgctcgggcgcgcgcgcatttccttatttgttgttgatgaagcgcattgc
atttcccaatgggggtatgatttccgccccgactttttaaaactcggggcggtccggcgc
gcgctcggttctccgccgtgcctggcgctgacggcgacggcgccgccggaggtgcgcgat
gatatcgtccgcacgctcgggatggagcgcgcccgccttcatatttattctgttgatcgc
ccgaacatcgccttaaaggtcgagcattgcttatcggctgaagaaaaagcagcgcgctta
gttgaatatgcggggcggcttgaagggccgggaatcgtttacttttcaagccgtcaatgg
gcggaagaaatggcccgccgccttgagggaagcggggcggggcgggtggcgtactaccat
gccggcatggatggggagcagcggctgctcgtgcagcagcaatttttatacggccagctc
gatatcgtttgctgtacgagcgcgtttggcatgggcgtgaacaaagaaaacgtccggttc
gtgctccattttcatatgccggctcagctcgaggcgtatgtgcaggaaatcgggcgcgcc
ggacgcgacggggcgccgagtctagccgtgctgttttacgctgatggcgaccgggccatc
gcccaggcggtggccgaagccgagcttcccgatccgcacgagctgcgcgaatggtgccgg
cggctgccagaagacgccgctgccgatcaatggaaggctgccatcgaagcgagcggattt
acggacatacaaaaacggcttgtggcgtactgtttagaatggggacaaacagcggcgtcc
gaacggatcacggctgaggcgaaggagcaactgtatgaaagaatggccgcggccatggag
gcgcggcggcgctggaagcgaaaaaagctgcaggaaatggatgactgggtgcacacctct
tcctgccggcgtgcggcgatcgtccgcgcgttcggggaggagctgacggacaagccggat
gtgtgctgcgatggttgcgggctgcggcttgatgcctatatgcgcgccgcccgccatccg
gctgcggcgccgatcggccactggcgcgaagagctatggcggatgtttttcagcgggggg
cggcaagatgaggcggcaaagtga

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