KEGG   Geobacillus thermoglucosidasius: Geoth_0908Help
Entry
Geoth_0908        CDS       T01531                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gth  Geobacillus thermoglucosidasius
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gth00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Geoth_0908
Enzymes [BR:gth01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Geoth_0908
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Geoth_0908
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
885622..886446
Genome map
AA seq 274 aa AA seqDB search
MPELPEVETIRRTLIPLAAGKTVADVQVFWPRIIKHPANISEFIETIKGQTIRDIHRRGK
FLKFIFDEHVLISHLRMEGRYAVSKKKDAIEPHTHVIFQFTDGTELRYRDVRKFGTMHLY
PKGEEDSRLPLSQLGPEPFSEEFTANFLAKRLRKTNRTIKAALLDQTVVVGFGNIYVDEA
LFRAGIHPERAASSLTDEEAACLHREMVATLQEAVEKGGSTVRSYVNTQGEIGMFQLQLF
VYGRKGEPCKRCGNPIQKTVVAGRGTHYCAFCQH
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgccagaactgccggaagttgaaacgattcgccgcactctcattccgttagccgctggc
aaaaccgttgctgatgttcaagtgttctggccgagaatcataaaacatccggcaaatatt
agtgaatttatagaaacgataaaaggacaaacgattcgtgacattcatcggcggggaaaa
tttttaaaatttatttttgatgaacatgtgcttatttcccatttgcgcatggaagggcgt
tatgcggtttcgaaaaagaaagatgccatcgagccgcatacgcacgtgatttttcagttt
acagacggcaccgaacttcgctatcgtgacgtaagaaaattcgggacgatgcatctttat
ccgaaaggagaagaagattcccggcttcctttgtcacagttaggcccagaaccgttttcg
gaagagtttaccgcaaattttcttgcaaagcggctgcgaaaaacgaaccgaacgatcaaa
gcggcgctgcttgaccaaaccgttgtcgtcgggttcggcaacatttatgtcgatgaagcg
ctgttccgcgccggaatccatccggaacgcgccgcgtcatcattaacggatgaggaggcg
gcatgtttgcatcgggaaatggtggcaacattgcaagaagcggtcgaaaaaggaggaagc
acggtaaggtcatacgtcaacacgcaaggggaaatcggaatgtttcaattgcagttattc
gtgtacgggcgcaaaggagaaccgtgcaaacgctgcggcaacccgattcaaaaaacggtg
gttgccggccggggcactcattattgcgccttttgccagcattaa

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