KEGG   Geobacillus thermodenitrificans: GTNG_1021
Entry
GTNG_1021         CDS       T00496                                 
Name
(GenBank) DNA-directed RNA polymerase omega chain
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
gtn  Geobacillus thermodenitrificans
Pathway
gtn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gtn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GTNG_1021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gtn03021]
    GTNG_1021
   03400 DNA repair and recombination proteins [BR:gtn03400]
    GTNG_1021
Enzymes [BR:gtn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GTNG_1021
Transcription machinery [BR:gtn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GTNG_1021
DNA repair and recombination proteins [BR:gtn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GTNG_1021
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ABO66397
UniProt: A4IM43
Position
1089715..1089921
AA seq 68 aa
MTMLYPSIDLLMKKVDSKYKLVTVVAKRARQLQDGSELMVNKPVSKKFVGQALEEIAGDK
VELVEEEK
NT seq 207 nt   +upstreamnt  +downstreamnt
atgacgatgttgtatccttccatcgatttgcttatgaaaaaagtggattcgaaatataag
cttgttacggttgtcgcgaaacgggcgcgtcagcttcaagacggctcggagctgatggtg
aacaagccagtgtcgaaaaaatttgtcggccaggcattagaggaaattgccggcgacaag
gttgaattagtggaagaagaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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