KEGG   Geobacillus thermodenitrificans: GTNG_2653Help
Entry
GTNG_2653         CDS       T00496                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gtn  Geobacillus thermodenitrificans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gtn00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GTNG_2653
Enzymes [BR:gtn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GTNG_2653
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GTNG_2653
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2759418..2760242)
Genome map
AA seq 274 aa AA seqDB search
MPELPEVETIRRTLLPLIVGKTVGDVQIFWPNIIRHPQDPEAFAARLVGQTVRGIDRRGK
FLKFLFDQDMLVSHLRMEGRYTVADAHEPLDPHTHVVFRFTDDSELRYRDVRKFGTMHVY
AKEEGDRQPPLDQLGPEPLSPAFSPAVLAERAAKTKRTVKALLLDQTVVAGFGNIYVDES
LFRAGILPERQAASLTDEEIKRLHEQMVATIGEAIMKGGSTVRTYVNTQGETGTFQHSLF
VYGRKGEPCKRCGTPIEKTVVAGRGTHYCPHCQR
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattgccggaagtggaaacgattcgccgcacgttgctgccgcttattgttggc
aaaacggtcggggatgtgcaaattttttggccgaacatcattcgtcatccacaagatccg
gaggcatttgccgcaaggcttgttggacagacggtgcgcggcatcgatcggcgagggaaa
tttttgaagtttttgtttgaccaagatatgcttgtttcccatttgcgcatggaagggcgt
tacaccgttgctgatgcacacgaaccgcttgacccgcacacgcacgtcgtgttccgcttc
actgacgatagtgaactccgttatcgcgatgtgcgcaagttcggaacgatgcatgtgtat
gccaaggaggagggagaccgccagccgccgcttgatcaattggggccggagccgctttcc
ccggcgttttctccagccgtattggcggagcgggccgcgaaaacgaaacggactgtgaaa
gcgttgctgcttgaccaaaccgtcgtcgctggatttggcaacatttacgtcgatgaatca
ctgtttcgcgctggcattcttcccgagcggcaggccgcttcactgacagacgaagaaatc
aagcggctgcatgaacagatggtcgccaccatcggtgaggccatcatgaaggggggaagc
acggtgcgaacgtacgtcaacacgcaaggggaaacgggtacgttccaacatagcttgttc
gtatatggccgcaaaggggagccgtgcaaacggtgcggaaccccgattgaaaaaacggtc
gtcgccggccgcggcacgcactattgcccgcactgtcagcggtag

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