KEGG   Gloeophyllum trabeum: GLOTRDRAFT_110364
Entry
GLOTRDRAFT_110364 CDS       T03130                                 
Name
(RefSeq) UV excision repair protein Rad23
  KO
K10839  UV excision repair protein RAD23
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03420  Nucleotide excision repair
gtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    GLOTRDRAFT_110364
  09124 Replication and repair
   03420 Nucleotide excision repair
    GLOTRDRAFT_110364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:gtr03051]
    GLOTRDRAFT_110364
   03400 DNA repair and recombination proteins [BR:gtr03400]
    GLOTRDRAFT_110364
Proteasome [BR:gtr03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    GLOTRDRAFT_110364
DNA repair and recombination proteins [BR:gtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      GLOTRDRAFT_110364
SSDB
Motif
Pfam: UBA ubiquitin XPC-binding Rad60-SLD Rad60-SLD_2 Crinkler Dsc3_N Ubiquitin_2 UBAP-1_UBA2 Phasin_2 Ubiquitin_5
Other DBs
NCBI-GeneID: 19299205
NCBI-ProteinID: XP_007864140
JGI: Glotr1_1_110364
UniProt: S7RQW5
Position
Unknown
AA seq 382 aa
MKITIKTLQQKVFQVDAEPSETVGDLKKKVLESQGHSVESQKLIYSGKVLPDSKTIESCE
IKEKDFLVLMVAKPKPTPAATSSTSTSTSSTPAPAPAPAAAPAPAAQPAAPVAAPAAPSP
APAASAPSQPAAAPAFGDASSFLTGEALQSSINNMIEMGFEREQVMRAMRASFNNPDRAV
EYLMTGIPSHLEERAASEQPAGGAAPRAAAPAAGAGAAPAAQPAPAAANTGPQNLFQLAQ
QQQQQLQQGGGAGAGAGGAGQIFDLAALRDLPQVAQLRELVAQNPALLQPLLQQLAEANP
QLAQILASNPEALYQLLGAGDGEGGEGGPATHVVQVTEEERAAIERLEALGFPRHIVLEA
YFACDKNEELAANYLFENGNED
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgaaaatcacgatcaagacgttgcagcagaaggtgttccaggtcgatgctgagccgtcg
gagacggtcggagacctgaagaagaaggtcttagagagccagggccactctgtcgagagc
cagaaactcatttattcagggaaggtattgccggattcaaagacgattgaatcatgtgaa
atcaaggagaaggatttcttggtgctcatggtcgcaaagccgaaacccacgcccgcagct
acctcgtcaacaagtacatctacctcttctactcccgcccccgcccccgctcctgctgct
gcacctgcccctgctgcccagcctgctgcccccgtcgcggcaccagcggcgccgtcaccc
gcacccgctgcctccgcgccctcccagcccgccgcggcccccgccttcggcgatgcgagc
tctttcctgacgggagaggccctccagagcagtatcaacaacatgatcgagatgggcttc
gagcgtgaacaggtgatgcgcgccatgcgcgcaagcttcaacaacccagatcgtgccgtg
gagtatctcatgactggtatcccctctcatcttgaggagcgggcggcgtctgaacaacct
gctggtggtgctgcaccgcgcgcggccgcgccggctgctggtgctggtgcggctccggct
gcccagcctgctccagcggcagcgaacactggacctcaaaatctgttccagctcgcccag
cagcagcaacagcagctgcagcaaggtggcggcgccggagccggtgcaggtggggcgggt
caaatcttcgacctcgcggccctccgggacctgccccaggtcgcccaactgcgcgagctg
gtcgcgcagaacccggcgttgctccagccgctcctgcagcagctggccgaggcgaacccg
cagctcgcgcagatactcgcgagcaatcccgaggcgctgtatcagctgcttggtgcaggt
gacggtgagggcggcgaaggcggtcccgccacgcatgtcgtgcaggtgacggaggaggag
cgcgctgctattgagcggctcgaggcgctgggtttcccaaggcacatcgtgcttgaggcg
tatttcgcttgcgacaagaacgaggagctcgctgccaattatttgttcgagaatgggaat
gaagattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (102)   
   KEGG ORTHOLOGY (1)   
   RefGene (97)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (122)   

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