KEGG   Guillardia theta: GUITHDRAFT_147790
Entry
GUITHDRAFT_147790 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K03678  exosome complex component RRP45
Organism
gtt  Guillardia theta
Pathway
gtt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GUITHDRAFT_147790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtt03019]
    GUITHDRAFT_147790
Messenger RNA biogenesis [BR:gtt03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     GUITHDRAFT_147790
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 17290343
NCBI-ProteinID: XP_005820594
JGI: Guith1_147790
UniProt: L1ICF9
Position
Unknown
AA seq 298 aa
MQVVLVLVHLVLLVLVLLVLVLLVLVLFLPHPPLPPSPLPLADFSTRVLGVVSAALVVPP
AERPAEGIVSLDLLPLPLADSSTDANRASETMKDGRAILQRAIVKSRCVDVESLCVIAGK
AVWKVTVELKVLENGGNVTDCCSLAAVLSLNHFKLNEVIVDGDKVKVFAYSERVIIADPS
KLEEQVMHGQLVIIAGSKDRSMLYGISKTGGAPLPPSQLQRCCEMAIDRAAELHEVCKEA
LRKNEEKTKKRDMDALRKIKRADVEEVEVEEEGESKEKEEKGEEGEAEKEAKKLKTET
NT seq 897 nt   +upstreamnt  +downstreamnt
atgcaggttgtgctcgtcctcgtccacctcgtcctcctcgtcctcgtcctcctcgtcctc
gtcctccttgtcctcgtcctcttcctcccccatcccccactaccaccatctcctcttcct
ctcgctgacttctcaacaagagtactcggggtcgtgagcgctgctctcgtcgttccccca
gcagagcgtccagcagaagggatcgtgtccctcgacctcctgccactccctcttgccgac
tcgtcaacagacgcgaaccgagcaagcgagaccatgaaagacggtcgagcgatcttgcag
cgagcgattgtcaagagccgatgcgtggacgtggagtcactttgtgtcatcgccgggaaa
gcagtgtggaaggttacagtggaattgaaagtgcttgagaatggaggcaacgtcacggac
tgctgcagccttgccgcagtcttgtctctcaatcacttcaaactcaacgaggtaattgtc
gacggggacaaagtcaaagtctttgcctacagtgagagagtcatcatcgccgatccatcc
aaactcgaagaacaagtcatgcatggtcaactggtgatcatcgcaggcagcaaagatcgg
tcgatgctgtatggcatctccaagactggaggagctccccttcctccttctcagctccag
cgatgctgcgagatggcgatcgatagagcagcggagcttcacgaagtttgcaaagaagcg
ctaaggaagaacgaggagaaaaccaagaagagagatatggacgctttgagaaagatcaag
cgagcggacgtggaggaggtggaagtggaggaggaaggagagagcaaggagaaagaggaa
aagggagaggagggagaggcggagaaagaggcgaaaaaactcaagactgaaacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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