KEGG   Guillardia theta: GUITHDRAFT_159783
Entry
GUITHDRAFT_159783 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
gtt  Guillardia theta
Pathway
gtt03040  Spliceosome
gtt04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GUITHDRAFT_159783
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    GUITHDRAFT_159783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gtt03041]
    GUITHDRAFT_159783
   04121 Ubiquitin system [BR:gtt04121]
    GUITHDRAFT_159783
   03400 DNA repair and recombination proteins [BR:gtt03400]
    GUITHDRAFT_159783
Enzymes [BR:gtt01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     GUITHDRAFT_159783
Spliceosome [BR:gtt03041]
 Complex B
  Other components
   Prp19 complex
    GUITHDRAFT_159783
 Complex C
   Prp19-CDC5 complex
    GUITHDRAFT_159783
Ubiquitin system [BR:gtt04121]
 Ubiquitin ligases (E3)
  U-box type E3
   GUITHDRAFT_159783
DNA repair and recombination proteins [BR:gtt03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    GUITHDRAFT_159783
SSDB
Motif
Pfam: WD40 Prp19 zf-Nse NBCH_WD40 U-box Rtf2 GED zf-C3HC4_2 Golgin_A5 GAGA_bind
Other DBs
NCBI-GeneID: 17300358
NCBI-ProteinID: XP_005830628
JGI: Guith1_159783
UniProt: L1J538
Position
Unknown
AA seq 488 aa
MAGLVCAMSGACAMTPMVSKKTGHVFEKSTILKFLLETQSCPITGQAMSAEDLIQVKANS
SVKPKPPSSTSLPSMIEMMQNEWDSQAVETHLLRKELDKVRAELSHTLYQHDAACRVIAK
VLKERDEALKERDEAIAALKAGRVAVPAAAESMEVDSGPTISEAIKERMTEKSAELSKGR
KKRAISPNLASEDTLKGFKEKLNKAVHKGSAPSCIDVHLENNTIVTGGMDSKVIVSDSAT
GKVVATMSGHTKPVRRVLFHQASDMVFSSSEVVKVWKTAQHLTDGKELCTFNNHKGEING
ISLHATGDYLVSASADKSWAFYDLTTAACCQVVPDKDAAGGYSAAQLHPDGLILGTGTID
SMVKVWDIKTISNVVSFKATSGGAVGSISFSENGYYMATTGADGLKVWDLRKLAKQAMFE
GNWKDARFDYSGTYLVGAGSSVKVWLAKSWNDVVELNGHGNDVVGAAFGKDASFIASCSS
DKTVRMWA
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcagggcttgtttgtgcgatgagcggcgcttgcgcgatgacgccgatggtgtcgaag
aagactggacatgtcttcgagaagagcactatcctcaagttccttctcgaaactcagtcc
tgcccgatcactgggcaagcgatgagcgcagaggacttgatccaagtcaaagccaacagc
tctgtgaagccgaagcctccatcctctaccagcctgccgtcgatgatcgagatgatgcag
aacgagtgggattcccaggcagtcgagacgcatctgctgaggaaggagctcgacaaggtg
agagctgagctgtcccacaccctctatcagcacgatgctgcatgccgcgttatcgccaaa
gttttgaaggagagagatgaggcgttgaaagagcgcgacgaggccatcgcggctctgaag
gctggacgagtcgccgttccagccgcggcagagagcatggaggtggactcaggacccact
atcagcgaagcgatcaaggagcgaatgaccgaaaaatcggctgaactatccaagggtagg
aagaagcgtgctatctcaccgaacctcgcttcagaggacactctcaagggattcaaggag
aaactcaacaaggctgttcacaagggatctgctccttcttgtattgatgtgcatctggag
aacaatacgattgttactggaggaatggattcgaaggtgattgtctcagatagtgccact
ggcaaggttgttgcaacgatgtccgggcacaccaaaccagtacgccgtgttctttttcac
caagcgtcggatatggtattctcttcatcagaggttgtcaaggtttggaaaacagcccaa
catctcacagatggaaaggagctctgtactttcaacaatcacaagggagaaatcaatgga
atttctcttcatgctaccggggattatcttgtttctgcatctgcagacaaatcatgggca
ttttatgatctcacaactgctgcttgctgccaggttgttccggacaaggatgcagcagga
ggatacagtgctgcacaacttcaccctgatggtctgattcttggtaccggcacgatagac
tcaatggtgaaagtttgggacatcaaaacgatatccaatgtggtctcattcaaagctact
tccggtggagcggtgggaagcatttccttctcagagaacggctactacatggccactact
ggcgctgatggcctcaaggtttgggatctccgaaagctagcaaagcaggctatgttcgag
ggcaactggaaggacgcacgatttgattacagtggaacatacctggtcggagctggatca
tccgtcaaggtttggctggcaaagtcatggaatgatgttgtggagttgaatggacatgga
aacgatgtggtcggggcagcattcggaaaggatgcaagcttcatcgccagttgctcgagc
gacaagactgtcaggatgtgggcttga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (63)   

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