KEGG   Guillardia theta: GUITHDRAFT_77816
Entry
GUITHDRAFT_77816  CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
gtt  Guillardia theta
Pathway
gtt03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    GUITHDRAFT_77816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtt03019]
    GUITHDRAFT_77816
Enzymes [BR:gtt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     GUITHDRAFT_77816
Messenger RNA biogenesis [BR:gtt03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     GUITHDRAFT_77816
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 MMR_HSR1 AAA_16 AAA_35 AAA_24 AAA nSTAND3 SRPRB AAA_10 AAA_22 ATP_bind_1 AAA_18 AAA_19 AAA_11 DUF815
Other DBs
NCBI-GeneID: 17294556
NCBI-ProteinID: XP_005824752
JGI: Guith1_77816
UniProt: L1IP05
Position
Unknown
AA seq 419 aa
MFSLEVGEELRIEADSKKVFVTLDTGHAEIFGWELPCGETVELARTKLALYTWHGCMISV
RGEPKCCYKGDTTPMKTFANLHAYLQQSRRAALNSNTSGPRIMVVGPPNTGKSSLVKLLL
NYAVREGERPMMVDLDVSKARALFLPGSLGAVAVTSFISPTDSNSMAHPLAYYYGYRDCT
RSSDLFKSLVDDLATQIAARQNSGFDEQGKAAGLVIDTFSYHASSQPSYDLLVACAKSMK
ADIIVVMDMDKLFCDLQRDLGGSDEGGVQIIKLAKGGGVVVPDHSFQKQAEKEVIQDYFY
GRERELCPRPIVFPFSKLQFFRTAATPQVPKDALPIGITAIESKMEVQVVEPDLNLENKL
LAVAGRNPSDDQELVCVNVAGFVHVQRVDLQEEKLTILAPNGLPMPSSKLLVGDIDFLE
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgttctccctcgaggttggagaggagctgaggatcgaggcggactcgaagaaggtattt
gtcacccttgacacagggcatgcagagatcttcgggtgggagctgccttgcggggagacc
gttgagctagctcgaaccaagttggctctctacacctggcatgggtgtatgatctcggtg
cggggggaacccaagtgctgctataagggagacaccacgccgatgaagacgtttgccaac
cttcacgcgtacctgcagcagagtcgccgcgcagccctcaactccaacaccagcgggccg
aggatcatggtggttggcccgcccaacaccggcaagtcgtcgctggtcaagttactcctc
aactacgctgtgagggagggagagaggccgatgatggtggacctggatgtctccaaggcc
cgcgctcttttcctccctggttcgctaggagccgtcgccgttacctctttcatctcacca
acggacagcaactccatggctcatcccctcgcctactactacggttacagagattgcaca
cggtcaagcgacctcttcaagagtctagtcgatgaccttgccacacaaatcgcagcgagg
cagaacagtggctttgacgagcagggcaaagctgcagggctggtcattgacacgttctca
taccacgcgagcagccagccgtcgtatgacctgctggtggcgtgtgccaagtcgatgaag
gccgacatcatcgttgtgatggacatggacaaacttttctgcgacctccagcgagacctg
ggagggtcggatgaaggaggagttcagatcatcaagctagccaaggggggtggagtcgtc
gttccggatcattccttccagaagcaggcagagaaggaggtgatacaagattacttctac
ggcagagagcgggagctctgcccacgtcccatcgtattccccttctccaaattgcagttt
tttcgcactgccgctaccccgcaagtcccgaaggatgctctgccgatagggatcacagcg
atcgagagcaagatggaggtgcaggtggtagagcctgacctgaacttggaaaacaagctc
ctggcggttgctggccgaaacccctcagacgaccaggagcttgtttgcgttaacgtagca
ggatttgtacatgtgcagcgagtggatctacaggaggagaagctcaccatcctggcgccc
aacgggctgccgatgccctcctcgaagctgctggtgggtgacatcgacttcttagagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (52)   

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