KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0619
Entry
HMPREF0424_0619   CDS       T01146                                 
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
  KO
K01214  isoamylase [EC:3.2.1.68]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva00500  Starch and sucrose metabolism
gva01100  Metabolic pathways
gva01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:gva00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    HMPREF0424_0619 (glgX)
Enzymes [BR:gva01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.68  isoamylase
     HMPREF0424_0619 (glgX)
SSDB
Motif
Pfam: CBM_48 Alpha-amylase ISOA1-3_C Isoamylase_C pulA_all-beta Cellulase
Other DBs
NCBI-ProteinID: ADB14520
Position
686139..688268
AA seq 709 aa
MHIRPGSMYPLGANYDGAGVNFALFSEVAKRVELCLFDEHDNETRIDMTEQNSYVWHNYV
SGIQPGQRYGYRVHGPYDPSHGLWCNPHKLLLDPYAKAIEGNIDGDESLFSYWFDNPDDI
SAMNTLDSADHTMKAAVINPYFDWGNDQHPMIPYHDSVIYEAHVRGMTNLDKRVPPDIRG
TYAGLAHPSVISYLRKLGVTAIELMPIHQFVNDSFLQNKGLSNYWGYNTIGFFAPQNSYS
SSGQRGEQVNEFKSMVKAYHAAGMEVILDVVYNHTAEGNDRGPTLSFRGIDNRAYYRLVD
NDQRHYFDTTGTGNSLLMRSPKALRLITDSLRYWVTEMHVDGFRFDLAATLARQFQEVDK
LSAFFDIIEQDPIISSVKLIAEPWDIGVGGYQVGGFPPSWSEWNGRYRDCVRDFWRSQPS
TLPEFASRLMGSSDLYEQNGRKPVASVNFITAHDGFTMNDLVSYNEKHNEANKEGNCDGA
NDNRSWNCGVEGPTNIHDVNELRERQIRNLFSTLLMSQGIPMICAGDEVMRTQKGNNNAY
CQDNAISWISWDYNETQRDMFDFVSKLIHLRLKHPVLHRRRFFTGRSAGDDVSDIPQVEW
LDHNGTVMDMEDWSNTHALSVMIYLNGSDIPETDWYGTRMVDNDFILIFNAHYEPITFTL
PDKRYGEKWKLIVDTYNPKGPELLYEAGFNIVAQSRSFLLLMSEHKPEH
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgcatatacgaccaggttccatgtatccgcttggcgcaaactatgatggcgctggcgtg
aattttgcgctgttttccgaagttgcaaagcgcgttgaattatgtttatttgatgagcat
gataacgaaacacgtattgatatgactgagcagaactcatacgtgtggcataactatgtt
tcaggcatacagcctggtcagcgttatggttatcgtgttcacggaccttatgatccttct
catggtttatggtgtaatcctcataagttgttgcttgacccatatgccaaggcgattgaa
ggaaatatagacggtgatgagagtcttttctcgtattggtttgataatccagatgatatt
tcagcaatgaatactttggattctgcagaccatacgatgaaggctgcagttattaacccg
tattttgattggggtaatgatcagcatcctatgattccgtatcatgattctgttatttac
gaagctcatgttcgtggaatgactaatcttgataaacgtgttcctccagatattagaggc
acttatgctggacttgcacatccaagcgttatttcttatttaaggaagcttggtgttact
gcaatagaattgatgcctattcatcagtttgtaaatgattctttcttgcaaaataaagga
ttaagtaactactggggatacaatactattggtttcttcgctcctcaaaattcttactcc
agttctggtcagcgcggagagcaggttaacgaatttaaatcaatggttaaggcatatcat
gctgcaggtatggaagttattctagacgtggtttacaatcacactgctgaaggcaatgac
cgtggccctactttgagtttccgtggtattgataatcgcgcatattatcgccttgtagat
aatgaccagcgtcactattttgatactaccggtactggtaattccttacttatgcgttct
ccgaaagcattgcgattgatcacagatagtttgcgttattgggtaactgaaatgcatgtt
gatggcttccgtttcgatttagcagcaactcttgcgcgtcagttccaagaagtagataaa
ctttctgcattctttgacattattgagcaggatcctattatttcaagtgtaaaacttatc
gctgagccttgggatattggtgttggtggatatcaagttggtggattccctccaagttgg
tccgaatggaatggaagatatcgcgattgtgtccgcgacttttggcgttcacaaccatct
acattacctgaatttgccagtagacttatgggtagctcagatttatatgagcaaaatgga
cgaaagcctgtagcttccgtgaactttattacagctcacgatggcttcactatgaacgat
ttagttagctataacgaaaagcataatgaagctaataaggaaggcaattgcgatggtgcg
aacgacaatcgttcgtggaattgcggtgttgaaggacctactaatattcacgatgttaat
gaattgcgtgaacgtcaaatacgtaatttgttctcaactcttttgatgagccagggcatt
cctatgatatgcgctggtgatgaagtcatgcgtacgcagaagggcaataacaatgcttat
tgtcaagataacgctatttcgtggataagttgggattataacgaaactcaacgagatatg
ttcgatttcgtttccaagcttattcacttgcgattaaagcaccctgtgttgcatcgtcgt
cgtttctttacgggtcgttctgctggagatgatgtaagcgatattccacaagttgaatgg
cttgatcataacggtactgttatggatatggaggactggtcaaatactcatgctttatct
gtgatgatttatttgaatggttcggatattccagaaactgactggtatggaacgagaatg
gttgataatgactttattcttatttttaatgcgcattatgaacctattacttttactttg
ccagataaacgttatggtgagaagtggaagttgattgtggacacatataatccaaagggt
ccagaattgttatatgaggcaggatttaatattgttgcacaatctcgtagtttcttgctt
cttatgagtgagcataaaccagaacattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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