KEGG   Gardnerella vaginalis 409-05: HMPREF0424_1349Help
Entry
HMPREF0424_1349   CDS       T01146                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:gva00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    HMPREF0424_1349 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HMPREF0424_1349 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    HMPREF0424_1349 (trpB)
Enzymes [BR:gva01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     HMPREF0424_1349 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1615922..1617115
Genome map
AA seq 397 aa AA seqDB search
MVNAVEQNMYYGEFGGQYVPDMIRPALDAVAAAYLQYKDDPEFRNELAGLLKDYDGRETP
LYYAESFTKYLGGAKVYLKREDLNHLGAHKMNNVLGQILLAQRMGKKRIIAETGAGQHGV
ATAAAAARFGMECEIFMGALDCERQKLNVFRMTLLGAKVHAVQEGTKTLKDAVTAAFMDY
AQHLDDTFYIVGSAVGPYPYPQMVRDFQSVISKESRRQILEKEGRLPNAVIACIGGGSNA
IGSFAAYIDDLSVRLIGAEGAGKGADTPQNAATMTNGKVGITDGMKTYVLMDDDGNELPA
YSISAGLDYPGVGPEHSYLKDSGRAEYYAITDDEAVQAFRALSRVEGIIPALESSHAIAQ
AMKMVPKMSKDDIVLVTVSGRGDKDVNQVARYLGIEL
NT seq 1194 nt NT seq  +upstreamnt  +downstreamnt
atggtaaacgcagttgaacaaaacatgtattacggtgaatttggcggacagtacgtacca
gatatgattcgtccagcactcgacgcagtagcagcagcttacttacaatacaaagacgat
ccagagttccgcaatgaattagctggattattaaaagattacgacggtcgcgaaacacct
ttatactatgctgaatctttcacaaaatatttaggcggcgcaaaagtatatttaaagcgc
gaagatttaaaccatctcggcgctcacaaaatgaataatgttctcggacaaattttactc
gctcagcgcatgggtaaaaagcgcattatcgctgaaaccggagccggtcagcatggcgtt
gccactgctgctgcagcagcacgattcggtatggaatgcgaaatttttatgggcgcactt
gattgcgaacgccaaaaacttaacgtttttagaatgactttgctcggtgcaaaagttcat
gctgttcaagaaggcacaaaaactttaaaagatgctgtaactgcagcatttatggattat
gcacagcacttggatgataccttctacatcgttggctccgcagtgggaccttacccttat
ccacaaatggttcgcgattttcaaagcgttattagcaaagagtcgagaaggcaaatccta
gaaaaggaaggcagattgccgaatgctgtaattgcttgcattggtggcggttctaatgca
attggttcttttgcagcatatattgatgatctgtctgtacgattgattggtgctgaaggc
gcaggtaaaggcgctgatactcctcaaaatgctgctactatgacgaatggaaaagttggc
attacggatggcatgaaaacttatgttcttatggatgatgacggtaacgagcttccagcc
tactctatttctgcgggattggattaccctggagtcggcccagaacactcatatttaaag
gattctggtcgcgcagaatactacgcaatcactgatgatgaagcagttcaagcttttcgc
gcactttctagagttgaaggaatcatcccagctttggaaagctcacatgcaatagcacaa
gctatgaagatggttccaaagatgagtaaggatgacattgttttagtaacagtttccggc
cgtggagataaggatgtgaatcaagtagcacgctatcttggaattgaattataa

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