KEGG T01344: HMPREF0421

Gardnerella vaginalis ATCC 14019: HMPREF0421_21247

Entry

HMPREF0421_21247 CDS T01344

Gene name

ebgA

Definition

cryptic beta-D-galactosidase subunit alpha (EC:3.2.1.23)

Orthology

K12111

evolved beta-galactosidase subunit alpha [EC:3.2.1.23]

Organism

gvg Gardnerella vaginalis ATCC 14019

Pathway

gvg00052	Galactose metabolism
gvg00511	Other glycan degradation
gvg01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:gvg00052]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:gvg00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2

Other DBs

NCBI-GI:

311115131

NCBI-GeneID:

9904825

UniProt:

E3D7N7

Position

complement(1545715..1548732)

AA seq 1005 aa
MVESVNDWENPSLTGKNRLPARAYFLSYECSSLAKTYKREFAHGYVCLNGKWKFALLKSP
NSVRKYMKTELQSNWDEVNVPHMWQFDGYGQLQYTDEAFPFPVDPPRVPTLTPTAVYQKE
IIISSIDDDEEIILRCDGIESYGEVYLNGRYVGMTKGSRLSAEFDITEAVVEGTNLFSIV
VMQYCDGTYLEDQDMWWASGIFRDIYVYRRPKVHLKDFFARTHLLDDGRACLSFDATISG
TSSFSCSIEDNGIVVSRIEQKVPNGEVHTKMYIDNPHLWNPEDPYLYDMVITVTSDTGSN
EVVSHRLGLVEISIKDGLMYLNGKYFVMHGVNRHDFDQNKGRAIDIADVKHELIMMKQHN
INAIRTSHYPNDPRFYQLCDELGFMVVAETDLECHGFEHVGNISMISDDSDWQLAYVSRI
EREVFQERNHACIVMWSLGNESGFGCNFRAMYHRCKELDPTRPVHYEEDRFGEVVDVLST
MYSRVSQMNDFGEHPTKKPRILCEYAHSMGNGPGGLQEYQKVIDCYPSIQGHFVWEWCDH
GIAQVDSQGRSYNAYGGDFHDYPNDGNFSIDGLVFPWKAASPGLLEYKQVLCPVHVDLDG
EYIVITNKRYFTDLDDIRIDLSLSENGHAIYNTTISPGELHPSNTIRVKLNIPKLGSNVG
ELLITAYVYSLHRYWWNDEHSPLGVYQYCYRAGNIELPCSQEKCSVFRPDIKVDEDYITI
TSKSQKYVFDRISGDLIHWYNASHDMIKTPIHFDIWRPLIDNYRQEYNELWKPNFLDIMQ
LDTRSVNWKSCDDIAEVTVEQRFAPPVLSFGMKLNSRYVVNSSGVLNLEICAEAYGSYKD
IIPRVGLTFAMPREYDNITWYGRGPGETYPDSCSSQVVGLWEASVDDMITPYVRPQDYGN
HQNTRWVSVRNSSGVGILVTRLSSSSMTDGFSYSAWPFTSNTIEQAKHRNELHEDDLVTI
NLNDQILGLGSNSWGSEVLDSHRIRFENCNFAFSFMPICDNATMD

NT seq 3018 nt +upstreamnt +downstreamnt
atggtagaaagtgttaatgattgggagaacccttcgttgactggtaaaaatagattaccg
gctcgagcatatttcttaagttatgagtgttctagtttagcaaaaacttataagcgtgaa
tttgcgcatggatatgtatgtttaaatggaaaatggaaatttgcattattgaaaagtccc
aattctgtccgaaagtatatgaaaacagaattacaatccaattgggatgaagtaaatgtt
cctcatatgtggcagtttgatggttatggtcaactgcaatatactgacgaagcatttcct
tttcctgttgatcctcctagagttccaactttgactccaacggctgtttatcagaaggaa
ataataatttcatctattgacgatgatgaagagattattttgcgttgcgacggtattgaa
agttatggtgaagtctatctaaatggcagatatgttggaatgacaaaaggatcgcgtctt
tctgctgaatttgatattactgaagccgtagttgaaggcacgaatttattctctatcgtt
gtaatgcaatattgcgatggaacgtatcttgaagatcaagatatgtggtgggctagtgga
atttttcgtgatatatatgtatatcgtagaccaaaggtacatttgaaagatttcttcgct
cgcactcatttattagatgatggtagagcctgtttatcttttgacgctacaataagcgga
acttcttctttttcatgcagtattgaggataatggtattgttgtttcgcgtattgagcaa
aaggttccaaatggagaagtacatacaaaaatgtatattgacaatccgcatctttggaat
cctgaagacccatatttatatgacatggtaattactgttacaagtgatactggatctaac
gaagttgtgtcgcatcgtcttgggctcgttgaaataagcattaaagatggtctcatgtat
cttaatggtaagtattttgttatgcatggagttaatcgtcatgattttgatcagaataaa
ggtcgtgctattgatattgctgatgtgaaacatgagcttataatgatgaaacagcataat
ataaatgcaatacgcacttctcattatcctaatgatcctaggttttatcaattatgtgat
gagcttggttttatggttgttgctgaaactgatctcgaatgtcatgggtttgaacatgtt
ggtaatatctccatgattagtgatgattctgattggcaactagcttatgtgtcacgcatt
gaacgtgaagtgtttcaagagcgtaatcatgcgtgtattgttatgtggtctcttggtaat
gaatcggggtttggatgtaatttccgggctatgtaccatagatgcaaagagcttgaccca
acgcgaccagtacattatgaggaagataggtttggtgaagttgttgatgttctttcaact
atgtattcgagagtttctcaaatgaatgattttggtgaacatccaacaaaaaagccaaga
atattgtgtgaatatgcacattctatgggcaatggtcctggtgggttacaggaatatcag
aaggttattgattgttatcctagtattcaagggcattttgtttgggaatggtgtgatcat
ggaattgctcaagttgattcgcagggtcgttcatataatgcgtatggcggagatttccat
gattacccaaatgatggcaactttagcatcgatggtcttgtttttccatggaaagcggca
agccctggtctattagagtataaacaggttttatgtccagttcatgtagatttagatggt
gaatatatagttataaccaataagcgttattttactgaccttgatgatattcgtattgat
ctttcattgagtgagaatggtcatgccatctataatacgactatctctccaggagagtta
catccttctaatacgatacgtgtgaaattaaatattcctaaactaggttcaaatgttgga
gagttattaataactgcttatgtttatagtttgcatcgttattggtggaatgatgagcat
tctccgcttggtgtatatcagtattgttatcgggctggtaatatagaactaccatgttcg
caagaaaaatgttctgtatttcgaccagatattaaagttgatgaagactatattactatc
acatcgaaatcgcagaaatatgtgtttgacagaatttctggtgatctcatacattggtac
aatgcttcccatgatatgattaaaactccgattcattttgatatttggcgacctcttatt
gataattatcgacaagagtacaatgaattatggaagcctaatttcttagatattatgcaa
ttagatactcgttccgttaattggaagagttgtgatgatattgctgaagtcactgtagaa
cagagatttgctcctcctgtgttatcgttcggaatgaaattaaatagtaggtatgttgta
aattcgtctggagtgcttaatcttgaaatatgcgctgaagcttatggtagttataaagat
attattccgcgtgtgggattaacttttgctatgcctcgagagtatgacaatattacttgg
tatggtcgtggtccgggtgaaacatatccagattcttgtagttctcaagttgttggactc
tgggaagccagtgtcgacgatatgataactccatacgttcgtccgcaagattatggaaac
catcaaaatacgcggtgggtatctgtgcgtaatagtagtggggtaggtattttagtaacg
cgtttgtctagtagttctatgactgatggattctcttattctgcttggccgtttacttcc
aatactattgaacaggcgaagcatagaaatgaattacatgaagatgatcttgttacaata
aatctcaatgatcaaatattgggtttgggatctaactcatggggcagtgaggttttagat
tctcatagaattcgttttgagaattgtaatttcgctttttcctttatgcctatttgcgat
aatgcaacaatggattga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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