KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_0162
Entry
HMPREF9231_0162   CDS       T01939                                 
Symbol
hsdM
Name
(GenBank) type I restriction-modification system, M subunit
  KO
K03427  type I restriction enzyme M protein [EC:2.1.1.72]
Organism
gvh  Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gvh02048]
    HMPREF9231_0162 (hsdM)
Enzymes [BR:gvh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.72  site-specific DNA-methyltransferase (adenine-specific)
     HMPREF9231_0162 (hsdM)
Prokaryotic defense system [BR:gvh02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HMPREF9231_0162 (hsdM)
SSDB
Motif
Pfam: N6_Mtase HsdM_N MTS Eco57I
Other DBs
NCBI-ProteinID: AEF31847
Position
181754..183466
AA seq 570 aa
MLLIVRVYSRILKNAYLISLYIAHALARIARIGSSRMDTRKEEERAELHRTIWKIADDLR
GSVDGWDFKAYVLCTMFYRYISENLCDYINKNEHESEGGDPDFDYAKISDEDAEPIRSEM
ISAKGFFILPSELFCNVLKRAPQDSDLNETLSRVFRNIEASSQGTDSSGDFKGLFSDYDV
NNIKLADTVEGRNKRFVKLLQVISEMKLGSVNNNVIEAFGDAYEYLMGLYASNAGKSGGE
YFTPAEVSMLLTRLGTVGKSSISSVYDPACGSGSLLLKAKKVLGIENINGGFYGQEKNVT
SYNLCRMNMFLHDVNFNKFEITCGDTLINPQIDANKKFELVVSNPPYSTSWEGDSNPLMI
NDPRFAPAGVLAPKSKADMAFVLHCLAHLAEDGAAAIVCFPGIMYRGGAEQKIRQYLVEH
NAVDCVIQLPSNLFFGTSIATCIMVLRKNKRNDTSILFVDASREFVKSTNSNKLSDENIE
QIVKWYTSRQDVEHIAHVASLEEVESNKYNLSVSTYVEAEDTREKIDITELNAQIVSVCA
REQELREQIEKIVSEIEAGSVNFDNSEVAQ
NT seq 1713 nt   +upstreamnt  +downstreamnt
ttgctgctgattgtgcgcgtttacagtagaatattaaagaacgcttatttaattagctta
tatattgcgcatgcgcttgcacgaattgcacgaatagggagcagcagaatggacactcgc
aaagaagaagaacgcgcggaattgcatcgcacgatttggaagattgcagatgatttgcga
ggttctgttgatggctgggacttcaaagcatacgtgttgtgcacaatgttttatcgctat
atttccgagaatttatgcgattatatcaataaaaacgagcatgaatctgaaggcggcgat
ccagattttgattatgcaaaaataagcgatgaagatgccgagcctattcgcagcgaaatg
atctcggctaaaggtttctttatacttcctagcgaactgttttgcaatgtgttgaagcgt
gctcctcaagatagtgatttaaacgaaacgttgagccgcgtgttccgcaatattgaagcg
tcgtctcaaggaactgattcgtctggtgattttaagggattattctccgattacgatgtg
aataatattaagcttgcagatactgttgaaggcagaaataagcgttttgttaagttatta
caagtgattagtgagatgaagcttggtagcgtaaacaacaacgtgattgaggcttttggt
gatgcttacgaatatttgatgggcttgtatgcgtctaacgctggcaagtctggcggcgaa
tactttacgcctgcagaagtctcaatgctgctcacacgtcttggaacagttggaaaatca
agcatttccagcgtgtacgatcccgcgtgcggttctggctcgcttcttttaaaggccaaa
aaagtgctaggcattgaaaatattaatggcggtttttacggtcaagaaaagaatgttact
agctacaacttgtgccgcatgaacatgtttttgcatgatgtgaattttaacaagtttgag
attacttgcggcgatactcttataaatccgcaaattgatgctaataaaaagtttgagctg
gttgtttctaatcctccttattccacgagttgggagggggattctaatccgttgatgatt
aacgatcctcgttttgctccagctggagttcttgctccaaaaagtaaggcagatatggca
tttgtgttgcactgtttggcgcatttggcggaagatggtgctgctgctattgtttgtttc
cctgggattatgtatagaggcggagctgagcaaaagattcgccaatatttagttgagcat
aatgctgttgattgcgtgattcaacttccgagcaacttgttctttggtacttctattgct
acgtgcattatggttttgcgcaaaaacaagcggaatgatacttctatattgtttgttgat
gcgagccgagagtttgtaaagtcaacgaatagtaacaagctttcggacgagaacattgag
cagattgttaagtggtacacttctaggcaagatgtggagcatattgcgcacgtagcatct
ttggaagaagtagaatccaataaatacaatctttcggtttctacatatgttgaagcggaa
gatactcgcgaaaagattgatattacggagcttaacgcgcaaattgtgtcggtttgcgct
cgcgagcaagagttacgcgaacagattgagaagattgtaagcgagattgaagctggcagc
gttaactttgataatagcgaggtggctcaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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