KEGG T01939: HMPREF9231

Gardnerella vaginalis HMP9231: HMPREF9231_0275

Entry

HMPREF9231_0275 CDS T01939

Definition

glycosyl hydrolase, family 2

Orthology

K12111

evolved beta-galactosidase subunit alpha [EC:3.2.1.23]

Organism

gvh Gardnerella vaginalis HMP9231

Pathway

gvh00052	Galactose metabolism
gvh00511	Other glycan degradation
gvh01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:gvh00052]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:gvh00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2

Other DBs

NCBI-GI:

385801241

NCBI-GeneID:

12444385

UniProt:

F6A1S9

Position

302934..305951

AA seq 1005 aa
MVESVNDWENPSLTGKNRLPARAYFLSYECSSLAKTYKREFAHGYVCLNGKWKFALLKSP
NSVRKYMKTELQSNWDEVNVPHMWQFDGYGQLQYTDEAFPFPVDPPRVPTLTPTAVYQKE
IIISSIDDDEEIILRCDGIESYGEVYLNGRYVGMTKGSRLSAEFDITEAVVEGTNLFAIV
VMQYCDGTYLEDQDMWWASGIFRDIYVYRRPKVHLKDFFARTHLLDDGRACLSFDATISG
TSSFSCSIEDNGIVVSRIEQKVPNGEVHTKMYIDNPHLWNPEDPYLYDMVITVTSDTGSN
EVVSHRLGLVEISIKDGLMYLNGKYFVMHGVNRHDFDQNKGRAIDIADVKHELIMMKQHN
INAIRTSHYPNDPRFYQLCDELGFMVVAETDLECHGFEHVGNISMISDDSDWQIAYVSRI
EREVFQERNHACIVMWSLGNESGFGCNFRAMYHRCKELDPTRPVHYEEDRFGEVVDVLST
MYSRVSQMNDFGEHPTKKPRILCEYAHSMGNGPGGLQEYQEVIDCYPSIQGHFVWEWCDH
GIAQVDSQGRSYNAYGGDFHDYPNDGNFSIDGLVFPWKAASPGLLEYKQVLCPVHVDLDG
EYIVITNKRYFTDLDDIRIDLSLSENGHAIYNTTISPGELHPSNTIRVKLNIPKLGSNVG
ELLITAYVYSLYRYWWNDEHSPLGVYQYCYRVGNIELPCSQEKCSVFRPDIKVDEDYITI
TSKSQKYVFDRISGDLIHWYNASHDMIKTPIHFDIWRPLIDNYRQEYNELWKPNFLDIMQ
LDTRSVNWKSCDDIAEVTVEQRFAPPVLSFGMKLNSRYVVNSSGVLNLEICAEAYGSYKD
IIPRVGLTFAMPREYDNITWYGRGPGETYPDSCSSQVVGLWEASVDDMITPYVRPQDYGN
HQNTRWVSVRNSSGVGILVTRLSSSSMTDGFSYSAWPFTSNTIEQAKHRNELHEDDLVTI
NLNDQILGLGSNSWGSEVLDSHRIRFENCNFAFSFMPICDNATMD

NT seq 3018 nt +upstreamnt +downstreamnt
atggtagaaagtgttaatgattgggagaacccttcgttgactggtaaaaatagattaccg
gctcgagcatattttttaagttatgagtgttctagtttagcaaaaacttataagcgtgaa
tttgcgcatggatatgtatgtttaaatggaaaatggaaatttgcattattgaaaagtccc
aattctgtccgaaagtatatgaaaacagaattacaatccaattgggatgaagtaaatgtt
cctcatatgtggcagtttgatggttatggtcaactgcaatatactgacgaagcatttcct
tttcctgttgatcctcctagagttccaactttgactccaacggctgtttatcagaaagaa
ataataatttcatctattgacgatgatgaagagattattttgcgttgcgacggtattgaa
agttatggtgaagtctatctaaatggcagatatgttggaatgacaaaaggatcacgtctt
tctgctgaatttgatattactgaagccgtagttgaaggcacgaatttattcgctatcgtt
gtaatgcaatattgcgatggaacgtatcttgaagatcaagatatgtggtgggctagtgga
atttttcgtgatatatatgtatatcgtagaccaaaggtacatttgaaagatttcttcgct
cgcactcatttattagatgatggtagagcctgtttatcttttgatgctacaataagcgga
acttcttctttttcatgcagtattgaggataacggtattgtggtttcgcgtattgagcaa
aaggttccaaatggagaagtacatacaaaaatgtatattgacaatccgcatctttggaat
cctgaagacccatatttatatgacatggtaattactgttacaagtgatactggatctaac
gaagttgtgtcgcatcgtcttgggctcgttgaaataagcattaaagatggtctcatgtat
cttaatggtaaatattttgttatgcatggagttaatcgtcatgattttgatcagaataaa
ggtcgtgctattgacattgctgatgtgaaacatgagcttataatgatgaaacagcataat
ataaatgcaatacgcacttctcattatcctaatgatcctaggttttatcaattatgtgat
gagcttggttttatggttgttgctgaaactgatctcgaatgtcatgggtttgaacatgtt
ggtaatatctccatgattagtgatgattctgattggcaaatagcttacgtgtcacgcatt
gaacgtgaagtgtttcaagagcgtaatcatgcgtgtattgttatgtggtctcttggtaat
gaatctgggtttggatgtaatttccgggctatgtatcatagatgcaaagagcttgatcca
acgcgacccgtacattatgaggaagatagatttggcgaagttgttgatgttctttcaact
atgtattcgagagtttctcaaatgaatgattttggtgagcatccaacaaaaaagccaaga
atattgtgtgaatatgcacattctatgggcaatggtcctggtgggttacaggaatatcag
gaggttattgattgttatcctagtattcaagggcattttgtttgggaatggtgtgatcat
ggaattgctcaagttgattcgcagggtcgttcatataatgcgtatggcggagatttccat
gattacccaaatgatggcaactttagcatcgatggtcttgtttttccatggaaagcggca
agccctggtctattagagtataaacaggttttatgtccagttcatgtagatttagatggt
gaatatatagttataaccaataagcgttattttactgaccttgatgatattcgtattgat
ctctcattgagtgagaatggtcatgccatctataatacgactatctctccaggagagtta
catccttctaatacgatacgtgtgaaattaaatattcctaaactaggttcaaatgttgga
gagttattaataactgcttatgtttatagtttgtatcgttattggtggaatgatgagcat
tctccgcttggcgtatatcagtattgttatagggttggtaatatagaactaccatgttcg
caagaaaaatgttctgtatttcgaccagatattaaagttgatgaagactatattactatc
acatcgaaatcgcagaaatatgtgtttgacagaatttctggtgatctcatacattggtac
aatgcttcccatgatatgattaaaactccgattcattttgatatttggcgacctcttatt
gataattatcgacaagagtacaatgaattatggaagcctaatttcttagatattatgcaa
ttagatactcgttccgttaattggaagagttgtgatgatattgctgaagtcactgtagaa
cagagatttgctcctcctgtgttatcgttcggaatgaaattaaatagtaggtatgttgta
aattcgtctggagtgcttaatcttgaaatatgcgctgaagcttatggtagttataaagat
attattccgcgtgtgggattaacttttgctatgcctcgagagtatgacaatattacttgg
tatggtcgtggtccgggtgaaacatatccagattcttgtagttctcaagttgttggactc
tgggaagccagtgtcgacgatatgataactccatacgttcgtccgcaagattatggaaac
catcaaaatacgcggtgggtatctgtgcgtaatagtagtggggtaggtattttagtaacg
cgtttgtctagtagttctatgactgatggattctcttattctgcttggccgtttacttcc
aatactattgaacaggcgaagcatagaaatgaattacatgaagatgatcttgttacaata
aatctcaatgatcaaatattgggtttgggatctaactcatggggcagtgaggttttagat
tctcatagaattcgttttgagaattgtaatttcgctttttcctttatgcctatttgcgat
aatgcaacaatggattga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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