KEGG T01939: HMPREF9231

Gardnerella vaginalis HMP9231: HMPREF9231_0972

Entry

HMPREF9231_0972 CDS T01939

Definition

putative alpha-amylase

Orthology

K01176

alpha-amylase [EC:3.2.1.1]

Organism

gvh Gardnerella vaginalis HMP9231

Pathway

gvh00500	Starch and sucrose metabolism
gvh01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:gvh00500]

SSDB

Motif

Pfam:

Alpha-amylase Alpha-amylase_C

Other DBs

NCBI-GI:

385801897

NCBI-GeneID:

12445077

UniProt:

F6A381

Position

complement(1166206..1167888)

AA seq 560 aa
MIHGIEVFTSFNKKALVKLKFVLARVAAITSCVAMILAGAVVASSPAIADEGAKSSQKTT
QKGVIVTAFQQNWRSIAKECKKTYGPEGVKYVQVSPPQDHIKGDQWWTSYQPVSYKLNSK
LGTEDEFKKMITTCKASGIGIIADAVINHTTGFANKDTVGVGGSKYDAANQSFPDAGYTK
DDFHKSTENINTYRKAEIVWTHRLVGLLDLDTSNPHVQKTLGEYFAHMLKLGVDGFRVDA
AKHMSPQDVKGIKDAAAEAAGTTPDKIWWMQETIGFSEQDPRIQPDQYLQTGEVNEFEYS
YRLRNYFYGSIENLKHITDKLIPSKKAAIFVTNWDTERDNASRVLTYKDGKKYELANTFM
LAYPYGTPNVFSGYEFTKRDEGAPGATQTSIPDVSCAKDSKWQCTQRLTSIRGMIGFYNA
VRGTKVTNWQDDDDNNVAFSRGNKGFLAINNTEEPQKVSYKTDLPDGEYCNVYESKDCTK
TVSVSGGKVKTTVDAESAVALHVNAVKSLGNARARNVTIFICVFVASICTFVVNRRFVEK
SKKLAKGNSDGVKTGETKGK

NT seq 1683 nt +upstreamnt +downstreamnt
atgatccacggcatagaagtatttacgagcttcaataaaaaggcgcttgtaaagttaaag
tttgtgttggcaagagttgcggctataacatcttgcgtcgctatgattttggcgggagca
gtagtcgcaagcagcccagcgattgcagatgagggtgcaaaatcatctcaaaaaactaca
caaaaaggtgtaatcgtaacagcgttccaacaaaattggagaagtatagctaaggaatgc
aaaaaaacgtacggcccagaaggcgtaaagtacgtacaagtatcacctccgcaagatcat
attaaaggtgaccaatggtggacaagctatcaacctgtaagctataagctaaattcaaaa
cttggcacagaagacgagtttaaaaagatgattacaacgtgcaaagcttcaggtattgga
attattgcagatgcggtaataaaccacacaactggttttgcaaacaaagacactgttggc
gttggtggaagcaagtatgatgctgcaaatcaatcgttcccagatgctggatatacaaaa
gacgattttcataagtcaacagaaaatatcaacacgtatcgaaaagcagaaatcgtttgg
acgcatcgacttgttggactattggatttggacacttctaatcctcatgtgcaaaaaact
ttgggagagtactttgcgcatatgctaaagcttggagttgatgggtttagagttgatgct
gcaaaacacatgtctccgcaagatgtaaagggcataaaagatgcagctgcagaggctgct
ggaacaacgccagataagatttggtggatgcaagaaacaatagggttttctgagcaagac
cctagaattcagccagaccaatatttgcaaactggtgaagtgaatgaatttgagtactct
tataggcttagaaactatttttatgggtctattgagaatcttaaacatatcacagataag
ttaattccaagcaaaaaagctgcgattttcgttacaaattgggatactgagcgagataat
gcaagcagagttttgacgtataaagatggtaaaaaatacgagcttgcaaacacgtttatg
ttggcgtatccatatggaactccaaatgtgttttctggttatgagtttacaaaacgagat
gagggagcacctggagctacgcaaacttcaattcctgatgtgagttgtgcaaaggattct
aagtggcaatgcacgcaaaggctaacttcgattcgcggaatgattgggttctacaacgcc
gttaggggcactaaggttactaattggcaagatgatgacgataataacgttgcatttagc
cgaggaaacaagggttttcttgcgattaataatacggaagagccgcaaaaagtgagttat
aagactgacttgccagatggtgaatattgcaatgtttatgagtctaaagattgtactaaa
actgtgagcgttagtggcggaaaagtaaagaccactgttgatgcggaatctgctgttgct
cttcatgttaatgctgtaaaaagtcttggaaatgctagagctagaaacgttacaatattt
atttgcgtgtttgttgcgtcaatttgtacgtttgttgttaatagaagatttgttgaaaaa
tcgaagaagcttgccaaaggcaatagtgatggtgttaaaacaggtgagactaaaggtaag
tga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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