KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_0984
Entry
HMPREF9231_0984   CDS       T01939                                 
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
  KO
K01214  isoamylase [EC:3.2.1.68]
Organism
gvh  Gardnerella vaginalis HMP9231
Pathway
gvh00500  Starch and sucrose metabolism
gvh01100  Metabolic pathways
gvh01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    HMPREF9231_0984 (glgX)
Enzymes [BR:gvh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.68  isoamylase
     HMPREF9231_0984 (glgX)
SSDB
Motif
Pfam: CBM_48 Alpha-amylase Isoamylase_C ISOA1-3_C pulA_all-beta Cellulase
Other DBs
NCBI-ProteinID: AEF30917
Position
complement(1182258..1184396)
AA seq 712 aa
MQIRPGSMYPLGATYDGAGVNFALFSEVAKHVELCLFDEQDNETRIDMTEQNSYVWHTYI
SGIQPGQRYGYRVHGPYDPNHGLWCNPNKLLLDPYAKAIEGNIDGDESLFSYWFANPDDL
AAMNTLDSADHTMKAAVINPYFDWGNDQHPMIPYHDSVIYEAHVRGMTNLNRNVPPEIRG
TYAGLAHPSVISYLKKLGITAIELMPIHQFVNDSFLQNKGLSNYWGYNTIGFFAPQNSYS
SSGQRGEQVNEFKAMVKAYHAAGMEVILDVVYNHTAEGNDRGPTLSFRGIDNRAYYRLVD
NDQRHYFDTTGTGNSLLMRSPKALRLITDSLRYWVTEMHVDGFRFDLAATLARQFQEVDK
LSAFFDIIEQDPIISSVKLIAEPWDIGVGGYQVGGFPPSWSEWNGRYRDCVRDFWRSQPS
TLPEFASRLMGSSDLYEQNGRKPVASVNFITAHDGFTMNDLVSYNEKHNEANKEGNNDGA
NDNRSWNCGVEGPTNIHDVNELRQRQMRNLFSTLLMSQGIPMICAGDEIMRTQNGNNNAY
CQDNAISWINWDFNSTQKDMFDFVSKLIHLRLDHPVLHRRRFFTGREPGDDVSEIPQVEW
FDHTGSVMDMEAWSNTHALSVMIYLNGSDIPETDWYGSRMVDNDFLLIFNAHYEPITFTL
PDKNYGEKWTLVVDTHNPKGPQLHYESGFNIVAQSRSFLLLMSENQEENNLA
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgcaaattagaccaggttctatgtatccgcttggagctacctacgacggtgcaggcgtg
aacttcgcattgttctctgaggtggcaaagcatgttgagctatgcttgttcgatgagcaa
gacaatgagactcgcatcgatatgaccgagcagaattcttacgtttggcatacttacata
tctggaatacagccagggcagagatacggttatcgtgtgcatggaccgtatgatccaaat
catggattatggtgtaatccaaacaaacttcttttggacccttatgcaaaggcaatagaa
ggcaatattgacggtgacgaaagcctattttcgtattggtttgctaatccagatgattta
gccgcaatgaacactttggattctgcagatcacactatgaaagcagctgttattaaccca
tattttgattggggtaacgaccagcatccaatgattccgtaccacgatagcgtgatttac
gaggctcatgttagaggaatgacgaatttaaatcgtaatgttcctccagaaattcgtgga
acatacgcaggtttagctcatccaagtgtaatatcttacttaaaaaagcttggtattact
gctattgagcttatgcctatccaccagtttgtaaatgattctttcttgcaaaataaggga
ttaagcaattattggggatataacaccattggattctttgctcctcagaattcgtactcg
agttctggacaacgtggcgagcaagttaacgaattcaaggcaatggttaaggcgtaccat
gctgcaggaatggaagttattctagacgttgtttacaaccataccgctgaaggaaacgat
agaggtccaaccttaagcttccgcggaatcgacaatcgcgcatactatcgtcttgtagat
aacgatcagagacattacttcgatactactggtactggaaattcgcttcttatgcgttct
cctaaagcattgcgactaatcacagacagcttgcgctattgggtaactgaaatgcacgta
gacggattccgatttgacttggcggcaacgcttgctcgtcaattccaagaagtagataag
ctttctgcattcttcgacattattgagcaagaccctattatttctagcgtaaaacttatt
gcagagccttgggatattggcgtaggaggatatcaagttggaggattccctccaagttgg
tccgagtggaatggtcgctaccgcgattgcgtacgcgatttttggcgctcgcagccttcg
actttgcctgaatttgcaagccgacttatgggaagctccgatttatatgagcaaaatgga
cgtaagcctgtagcttctgtaaactttattaccgctcacgatggttttactatgaacgat
ttggtgagctataacgaaaagcataatgaagcgaataaagaaggtaataacgacggtgct
aacgataatcgttcgtggaattgtggagtagaaggtcctactaatattcacgatgttaac
gaacttcgtcaacgtcaaatgcgaaacctgttctcaactttgttgatgagccagggcatt
cctatgatttgcgctggtgacgagattatgcgtactcaaaatggaaacaacaacgcatat
tgccaagataatgctatttcttggattaattgggattttaattccacacaaaaagatatg
tttgattttgtttctaagcttattcatttaagactagatcatcctgttcttcacaggcgt
agattctttactggtcgagaaccaggggatgatgtttcagagattccacaagtagaatgg
tttgatcatactggttctgttatggatatggaggcatggagtaatactcatgctctttcg
gtaatgatttatttgaatggttcagatattccagaaaccgattggtatggaagcagaatg
gtagataatgacttccttcttattttcaatgcgcattatgagcctataacatttactttg
ccagataagaattatggtgaaaagtggactcttgttgtggacactcataatccaaaagga
ccgcaattgcattatgaatcaggattcaatattgttgctcaatcacgaagtttccttctg
cttatgagtgaaaatcaagaagaaaataatctagcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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