KEGG T01939: HMPREF9231

Gardnerella vaginalis HMP9231: HMPREF9231_1243

Entry

HMPREF9231_1243 CDS T01939

Definition

D-alanine--D-alanine ligase

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

gvh Gardnerella vaginalis HMP9231

Pathway

gvh00473	D-Alanine metabolism
gvh00550	Peptidoglycan biosynthesis
gvh01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:gvh00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:gvh00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp ATPgrasp_ST

Other DBs

NCBI-GI:

385802151

NCBI-GeneID:

12445348

UniProt:

F6A3I2

Position

complement(1509348..1510493)

AA seq 381 aa
MTKKRVVFLYGGKADEHSISCISAAGVLSAVDESRFEIVRIAITKQGEWIVGGEDPRNFR
MEQGELPVITKTEQTRDVVLDPAKGADGFLVREADGTLTSLGHIDAVFPVLHGPNGEDGT
LQGLLEMMQVPYVGCGVLASAACMDKYYAKQLFKAAGIDVAPGIALDVRKFANDCANHFD
AYANEILEQVEEAKLEYPLFVKPSRAGSSFGVTKVESRDAKALADAVFEASKHDWRVLIE
QGIDAREIECAVLAARDGEEPKASWPGEVVLDKRQAGEDQFYDFDSKYMDSAASHVEVPA
NLPEETLQRVRNTALAAFKAADGRGLSRVDSFVTPEGHVMINEINTMPGFTPISMYPKAW
EATGISYSDLITKLIEGVILD

NT seq 1146 nt +upstreamnt +downstreamnt
atgacgaaaaagcgtgtagtgttcttgtatggcggtaaagcagacgaacattcgatttct
tgcatatcggctgctggagtactcagtgctgtagacgaaagtcgatttgaaatcgtacgt
attgcaatcacaaagcaaggcgagtggattgttggcggcgaagatccgcgaaacttccgc
atggagcaaggcgagttgccagtaatcacaaaaaccgagcagacgcgcgatgttgtgcta
gacccagctaaaggtgccgacggatttttggtgcgagaggcagatggcacgcttacaagt
ttgggtcatattgacgctgttttcccggttcttcacggcccaaacggtgaagacggaacc
ttgcaaggtttgctagaaatgatgcaagttccatacgttggttgcggagttttggcatcc
gccgcgtgcatggataagtattacgctaagcaactttttaaggcggctggaattgatgtt
gctccaggaatcgcgctggatgtgcgaaagttcgctaatgattgcgcaaatcactttgac
gcgtacgcaaacgaaattcttgagcaagttgaagaagcaaaactcgagtatccacttttt
gtaaaaccaagccgagcaggatctagttttggcgttacaaaagttgaatcgcgcgatgct
aaagctttggcagatgccgtttttgaggcttcaaagcacgattggcgagtattgatagag
caaggaattgacgcgcgagaaattgagtgcgcggttcttgccgctcgcgacggcgaagag
cctaaagcgagctggcctggagaagttgtgctagacaagcgtcaggctggcgaagaccag
ttctacgattttgacagcaaatacatggattccgcagcttcgcacgtggaagtgccagca
aatctgccagaagaaactttgcagcgcgttcgcaatactgcgctcgcagcgttcaaagca
gcggacggtcgaggacttagtcgcgtggattctttcgttactccagaaggacatgtaatg
attaacgagatcaacaccatgcctggatttacgccaatttccatgtatccaaaagcttgg
gaagcaacgggaataagctacagtgatttaatcacaaaacttattgaaggcgtgatttta
gactga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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