KEGG   Gluconacetobacter medellinensis NBRC 3288: GLX_28100Help
Entry
GLX_28100         CDS       T01631                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gxy  Gluconacetobacter medellinensis NBRC 3288
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gxy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GLX_28100
Enzymes [BR:gxy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GLX_28100
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GLX_28100
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3135330..3136202
Genome map
AA seq 290 aa AA seqDB search
MPELPEVETVMRGMRVHLEGHTISRASTHHTGLRWPFPPGLAASLAGRRVDGFARRGKYI
LITLSGGMVLVMHLGMSGRVLLSTPVEAMPPALHEHLVIETAEGARCGLVDPRRFGMVDL
VTAGAVESHRLLAGMGPEPLGNRFDGAWLAARGKGRRSSIKALLLDQRVVAGLGNIYVSE
ALFRARIHPARAAGAVSGAEYARLATEIRTVLEEAIAAGGSSLRDYVQPDGELGYFQHAW
RVYGREGQGCPDCPGPPACGGVVRITQSGRSTFFCPRQQEMKNARDEDLS
NT seq 873 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactccctgaagtcgaaactgtgatgcgcgggatgcgagtgcatcttgaaggt
cacactatttcccgcgccagcacgcaccataccgggctgcgctggccgtttccccccggt
ctggctgcaagccttgcgggccgccgcgtggatggattcgcccggcgggggaaatacatc
ctcatcaccctttcgggcggcatggtcctggtcatgcatctgggcatgtcgggacgggtg
ctgctttcgacacctgtggaagcgatgccacccgcccttcacgaacatctggtgatcgag
acggccgagggcgcacgctgcggactggttgacccccgccggttcggtatggtcgatctt
gtaacggcaggtgctgtggaaagtcaccgcctgctggcgggcatgggccctgaaccgctg
ggtaaccgttttgatggcgcatggcttgccgcgcgcggcaaggggcggcgcagcagcatc
aaggcgctcctgctcgaccagcgcgtggtggcgggcctgggcaatatatatgtgtctgag
gcgctgttccgcgcgcgcattcatcccgcgcgcgccgcaggcgcggtgagcggggcggaa
tatgcccgccttgccaccgaaatccgcaccgtgctggaggaggcgatcgccgctggcggc
tcaagcctgcgtgattatgtgcaacccgacggggaattaggctatttccagcatgcgtgg
cgcgtatatgggcgcgaggggcagggctgcccagactgccccggcccgcccgcgtgtggc
ggggtggtgcgcatcacccagtccgggcgctcgactttcttttgcccccgtcagcaggag
atgaaaaacgctcgggatgaagacttgtcttga

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