KEGG T01399: GYMC52

Geobacillus sp. Y412MC52: GYMC52_0206

Entry

GYMC52_0206 CDS T01399

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

gya Geobacillus sp. Y412MC52

Pathway

gya00473	D-Alanine metabolism
gya00550	Peptidoglycan biosynthesis
gya01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:gya00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:gya00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp CPSase_L_D2 RimK ATPgrasp_ST ATPgrasp_Ter GARS_A

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

227712..228815

AA seq 367 aa
MKTRVGVLYGGKSPEHQVSLSTAMAVMNAIDPHKFDVIPIYITPEGQWIKGEQLTGPIEE
IKQLQFTSAATALIPVSLNQVPAADSAAGGNEETIDVIFPLLHGPNGEDGTVQGLLEILN
IPYVGNGVLASAVGMDKVMMKNLFTQAGLRQAKYIAVTKYDWQKSGETVYDRIERELGYP
CFVKPANAGSSVGISKCKQRGDLKAAFIEAFQYDRKIIIEEAIVGREIEIGVIGNDEPIC
SVVGEIVPKKEFYDYEAKYEDGQTELIIPADVTKEQYETIKQMAITAFQALDLSGLARVD
FFLAEDGAVYINEVNTMPGFTPYSMFPLLWQHSGVPYPELIERLIALALERHQEKQTITY
TFKKEKR

NT seq 1104 nt +upstreamnt +downstreamnt
atgaaaacgagagttggcgtgttatacggcggcaaatcaccggagcaccaagtatcgttg
tcgacggcgatggcggtgatgaacgccattgatcctcataaattcgatgtcattccgatt
tatattacaccggaaggtcaatggatcaagggcgaacaactgaccggaccgatcgaggaa
atcaagcagctgcaattcacttcggcggcgaccgccttgattccggtttccttgaaccaa
gttccggctgccgattcggctgcgggaggaaacgaggaaacgatcgatgtcattttcccg
cttttgcatgggccgaacggtgaagacggaacggtgcaagggttgcttgagatattgaac
attccgtatgtcggcaacggggtgcttgcttccgcggtcggcatggataaggtgatgatg
aaaaacttgtttacgcaggccgggttgcgccaagcaaaatatatcgccgtgacgaagtac
gattggcaaaaaagcggcgagacggtgtatgaccggatcgaacgagagcttggctacccg
tgctttgtcaagccagccaacgccggttcgagcgtcggcatttccaaatgcaagcagcgc
ggcgatttaaaagccgcatttatcgaggcatttcagtatgaccgaaaaattattattgaa
gaggcgattgtcggccgcgaaattgaaatcggcgtgatcggaaatgatgagccgatttgt
tcggtcgttggcgaaattgttcccaaaaaggaattttacgactatgaagcgaaatacgaa
gacgggcaaaccgaattgatcatcccagcggacgtaacgaaagaacagtatgagacgatc
aaacaaatggccattacggcgtttcaggcgctggatttgtctggacttgcgcgcgtcgat
tttttcctcgccgaagatggcgctgtttatatcaacgaagtgaacacgatgccaggcttt
acgccatacagcatgttcccgcttctttggcagcacagcggtgtgccgtacccggagctg
attgaacggcttatcgcgctcgcattggaacgacatcaagaaaagcagacgatcacgtac
acgttcaaaaaagaaaagaggtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GYA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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