KEGG   Geobacillus sp. Y412MC61: GYMC61_0788Help
Entry
GYMC61_0788       CDS       T01101                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gyc  Geobacillus sp. Y412MC61
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gyc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GYMC61_0788
Enzymes [BR:gyc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GYMC61_0788
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GYMC61_0788
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
783904..784728
Genome map
AA seq 274 aa AA seqDB search
MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK
FLKFLLDRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVY
AKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRPVKALLLDQTVVAGFGNIYVDES
LFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGAFQHSLF
VYGRKGEPCKRCGTPIEKTVVAGRGTHYCPRCQR
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccggaggtggaaacgatccgtcgtacgcttttgccgcttattgtcgga
aaaacgattgaggatgtgcgcatcttttggccgaacatcatccgccatccgcgagacccc
gaggcgtttgcggcaagaatgatcggacagacggtgcgtggtttggaacggagagggaaa
tttttgaaattcctgctcgaccgcgatgcgctcatttcccatttgcgcatggaagggcgc
tacgccgttgcttctgccctcgagccgctcgaaccgcatacgcacgtcgtgttttgcttc
acggacggcagcgaactccgttaccgcgacgtgcgcaagttcggaacgatgcacgtttat
gccaaagaagaagctgaccgccggccgccgcttgctgagcttgggccggagccgctttcc
ccggcgttttccccagctgtattggcggagcgggcggtgaaaacgaaacggccggtcaaa
gcgttgctccttgatcagacggtcgtggctgggtttggcaatatttatgtcgacgaatcg
ctgtttcgcgccggcattcttcccggccggccggccgcctcgctctccagcaaagagatc
gagcgcctgcatgaggaaatggtggcgacgatcggcgaggcggtcatgaaagggggaagc
acggtgcgcacgtacgtgaacacgcaaggggaagcgggtgcgtttcagcatagcttgttc
gtctacggacgcaaaggagagccatgcaaacgatgcggcacgccgattgaaaaaacggtc
gtcgccggccgcggcacgcattattgcccgcgctgccagcgctag

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