KEGG T01100: GYMC10

Paenibacillus sp. Y412MC10: GYMC10_0868

Entry

GYMC10_0868 CDS T01100

Definition

D-alanine/D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

gym Paenibacillus sp. Y412MC10

Pathway

gym00473	D-Alanine metabolism
gym00550	Peptidoglycan biosynthesis
gym01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:gym00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:gym00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp RimK CPSase_L_D2 GARS_A ATP-grasp_3 ATPgrasp_ST

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1014154..1015248

AA seq 364 aa
MGQDKLTVGLVYGGKSGEHEVSLSTAFAVMNAFDFDKYEIVPFYISKQGTWRIGSKMSAP
FARQEELKLAEGEGTQTALNAVFSRLYGEENQAVDIMFPLLHGTFGEDGTIQGLFEMADI
PYVGTGVLASAAGMDKVVMKKLFAQAGLPQCEYCYFNRTQWERSQHEVLKNIEDKLGFPS
FVKPANLGSSVGISKAKNREQLKAAIESALRFDDKIIVEEFVDAREVEVSVLGNDEPMAS
VPGEIVSSSEYYDYAAKYTDGQSQMQIPAEIDPDTADRLRDLAIAAFKAIEGGGITRADF
FVRRSDGAILINEVNTMPGFTPFSMYPLLWRETGVSYRELLDRMIELGLERYHRKQSLIY
ENQA

NT seq 1095 nt +upstreamnt +downstreamnt
atgggacaggataaattgacggttggtttagtatacgggggaaaatccggcgagcatgag
gtgtcgctatccacggcattcgcggtcatgaacgcttttgattttgataaatacgagatt
gtcccgttttatatttcaaagcagggaacctggagaatcggcagcaagatgtcggctcct
ttcgcccggcaggaggaattgaagctggctgaaggggaaggcacgcaaacggcgctgaac
gccgtgttcagcagactgtacggggaagagaatcaggcggtcgatattatgttcccgctg
cttcacgggacgttcggcgaggacgggacgatccaggggctgttcgaaatggcggacatc
ccttacgtgggaaccggcgtgcttgcatccgctgccgggatggacaaagtcgtcatgaag
aagctctttgcccaggcaggattgccgcaatgcgagtactgctatttcaaccgcacccag
tgggagcggagccagcatgaagtgctcaagaacatcgaggacaaactcggattcccgagc
ttcgtcaagccggctaacctcggctcgagcgtcgggatttccaaggccaagaaccgggaa
cagctgaaggcagcgattgaatccgcgctccgcttcgatgacaagatcatcgtagaagag
ttcgtcgatgcgcgcgaagtggaggtcagcgtgctcggcaatgacgagccgatggcgtcc
gttccgggtgaaatcgtctcttccagtgaatactatgactacgcggccaaatatacggat
ggacaatcgcagatgcaaatcccggccgagatcgacccggatacggcggatcggctgcgc
gacctggccattgccgccttcaaagcgattgagggcgggggcattacccgcgccgacttc
tttgtccgccgttcggacggtgcgatactgatcaacgaagtgaacacgatgccgggcttc
acgccgttcagcatgtacccgctcttgtggcgggagacgggcgtttcctatcgcgagctg
cttgaccggatgatcgagctgggccttgagcggtaccatcgcaagcaatccctgatttat
gagaaccaggcgtaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GYM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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