KEGG   Paenibacillus sp. Y412MC10: GYMC10_2375Help
Entry
GYMC10_2375       CDS       T01100                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gym  Paenibacillus sp. Y412MC10
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gym00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GYMC10_2375
Enzymes [BR:gym01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GYMC10_2375
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GYMC10_2375
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2714868..2715689
Genome map
AA seq 273 aa AA seqDB search
MPELPEMENYRRLLSQSILNVPITDVVVNREKSLNVTIDEFTSALKGSKVIFVERRGKHL
IFHLHNGGRLLLHLMLGGILYLGRRDDEERPSRSTQVEITFGDQVLYFIGLRLGYLHFLT
ARETENALKDLGPELLDRRMTKARFVELIGKRRGALKTTLVNQQVVAGIGNCYADEIAFD
ARIHPLSKIQDLPEESLEQLYDSTVKVMHEATDGGGYMEMPFQEGDVLTGAYNDECKVYD
REGEPCVRCGTPIVKAEHASRKVFFCPNCQHEV
NT seq 822 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactgccggaaatggagaattaccgaagattgttatctcagagcattctgaat
gtgccgatcaccgatgtggtcgtgaaccgtgaaaaatccttgaatgtgacgattgacgag
tttacttcggccctgaagggaagcaaggtcatttttgtggagcggagaggcaaacatctc
atattccatttgcataacggaggcagactcctgctgcatctgatgctggggggcattttg
tatctgggacgcagggatgatgaggagcgcccttcccgttcgacccaggtcgagatcacg
ttcggtgaccaggtgctgtattttatcggccttcgcctgggttatctgcattttctaaca
gcgagggaaaccgagaacgccctaaaagaccttggtcctgagcttctggatcggcgaatg
accaaagcgcgtttcgtcgaactgattggaaaacggcggggcgccttaaaaacgacgttg
gtcaatcaacaagtcgtcgccggcatcggcaactgttatgcggacgagatcgcttttgat
gcccgaatccacccgctatccaaaattcaggatttgccggaggagtcactagagcagctg
tacgacagcaccgtcaaagtgatgcacgaggcgacggacggcggaggatacatggaaatg
ccctttcaggaaggggatgtgctgacaggtgcttataacgacgaatgcaaagtgtacgat
cgtgaaggagagccctgcgttcgctgcggtacgccgatcgtgaaggcggagcacgcctcg
cgcaaagttttcttttgcccgaattgccagcatgaagtctaa

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