KEGG T01100: GYMC10

Paenibacillus sp. Y412MC10: GYMC10_2667

Entry

GYMC10_2667 CDS T01100

Definition

glycoside hydrolase family protein

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

gym Paenibacillus sp. Y412MC10

Pathway

gym00052	Galactose metabolism
gym00511	Other glycan degradation
gym00600	Sphingolipid metabolism
gym01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:gym00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:gym00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:gym00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_N Glyco_hydro_2_C Glyco_hydro_2 CBM_6 BetaGal_dom4_5

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3038234..3041698

AA seq 1154 aa
MNKRALFNDGWTFAKSGLDVEDSENLQFQPVDLPHDWLIHNTEELYENSIGWYRKEWLRN
NDGGQVFLCFDGVYMDSSVYVNGRPMGEWKYGYSSFEHEITEALRDGENVIVVKVVHQSP
NSRWYSGAGIYRNVWLKTRESNHIVTDGVYIATKHQEDGWLVEVETEMKVVDDVLIKHVI
LKDGQIIAETSDRVDANHTCSSAGSILNTQTLAVKDPLLWSPEEPNLYQLVTEMKLSGTK
RSAVSQYAILEAVTHNVGFRHIRLDPHQGFLLNGSKFKLNGVCEHHDLGALGAAFNKTAL
ARRFKILKEMGVNAIRTAHNMPAKELMELADEMGLLIVSEAFDMWERPKTPYDYARFFRE
WVQRDVKSWVKRDRNHPSLIMWSIGNEIYDTHADERGQDITRMLMDEVYTYDPKQNAKVT
IGSNYMPWENAQQCADIVKVAGYNYAEKYYENHHREHPDWIIYGSETASVVQSRGIYHFP
FEKSILADDDEQCSSLGNSSTSWGAKSAEACILAERDTPFSLGQFIWTGFDYIGEPTPYH
TKNSYFGQIDTATFKKDSYYIYQAAWTDYKTKPMVHLLPYWDFNDGQMIDVRICSNAPKV
ELRLNGETVGTHDIDHARGRELVGWWKIPYVKGELKAIAYDETGRIVATDVKRSFGNAKR
IVLRPDKEELRADGTDLIFVEITMEDEDGYSVENANNRVEVHVTGAGRLLGLDNGDSTDY
DPYKGLSRRLFSGKLMAIIGATLEPGGIGIEVSSTGMERQSLRLTSIPVQDDVTQGVSAS
MRNEEGPCLTGNRDEIPLRKIELISEKGQVFDPANRQMTVRAILHPLAASYQEVEWAVVN
DAGIESNIASVEANGHAAIVTALGDGEFRLRCTSRNGTGKTRLISQLEFKVDGLGAAYKD
PYSFISAGLYDYSQGEVGNGNERGVATSRDGETQVGFRDIDFGPHGSDTITIPIFALSSE
AYALQIWEGMPGEEGSSLLADCIYQKESKWNVYQEETYRLSKKLRGITSICFVLRQKVHI
KGFYFQPGNRAFEPNFAADCDRIYGDTFTVLDNRFVQGIGNNVSLEFDEMDFLADGASKL
VVYGRSALDKNTIHIRFAHSDGESNRLVEFRQAYEYEEQVFDLEPVAGKQKVTFIFLPGS
QFDFGWFRFVRTDS

NT seq 3465 nt +upstreamnt +downstreamnt
atgaataaaagagctttatttaatgatggatggacgtttgcaaaaagcggtttggacgtt
gaagattcggagaatctacaatttcagcctgttgatcttcctcatgattggctcatacat
aacacggaggagttatacgagaacagcattggctggtaccggaaggaatggttgcggaat
aatgacggcggtcaggtcttcctctgttttgacggtgtgtacatggattcttccgtctat
gtcaatggtcgtcctatgggcgaatggaagtatggctattcttcatttgaacacgagata
acggaggcgctccgggacggtgagaatgtcatcgtcgtaaaggttgtgcatcaaagcccg
aacagccgatggtactccggggcaggcatttatcggaatgtatggttaaagacaagggaa
tccaaccacatcgtcacggacggcgtttatatagcgactaagcatcaggaagatggatgg
ctggttgaagtcgagacggaaatgaaggtcgtggatgatgtgctgatcaagcatgtgatt
ttgaaggatgggcagatcatcgccgagacttctgaccgggtcgacgccaatcacacgtgc
agcagtgcaggcagcatcctaaatacgcaaacattagctgtcaaggatccgctgctctgg
agtccggaagaacctaacttgtatcaattggtgaccgaaatgaagctgagcggaaccaag
cgttccgcagtttcgcagtatgcaatcttggaagccgtcactcataacgtgggattccga
cacattcggctggatcctcatcaagggttcctgctgaacggcagcaaattcaaattgaac
ggcgtatgcgagcatcatgatctcggcgctttgggagcagcctttaacaaaaccgcattg
gcgagaaggtttaaaattctgaaagaaatgggggttaacgcgattcgcaccgcccataat
atgccggctaaggagctgatggagctggcggatgaaatggggctgctgattgtatcggaa
gccttcgatatgtgggagcggccgaaaacgccttatgattatgccaggttttttcgggaa
tgggttcagcgtgacgtgaagagctgggtcaaacgggaccgcaaccatccgagccttatc
atgtggagcatcgggaatgagatatatgatactcatgcggacgagaggggccaggacatc
acaagaatgctgatggatgaggtttatacatacgatcctaagcaaaatgcaaaggttacc
attggatcgaattatatgccttgggagaacgcgcagcaatgtgccgatattgtgaaggta
gcaggatataactatgccgagaaatattacgagaaccatcaccgggaacatccggattgg
atcatatatggcagtgagaccgcgtccgtcgtacaaagcagaggcatctaccatttcccg
ttcgaaaaatccattctggccgatgatgacgagcagtgttcctccctcggtaacagctcg
actagctggggagcgaaatcggcggaggcatgcatcctggctgaacgggatacgcccttc
tcgctcggtcaattcatatggacagggttcgattatattggtgagcctacgccgtaccat
actaaaaactcctatttcggacagattgatacggcaacctttaaaaaggactcctattat
atctatcaagccgcttggacggattacaaaacgaagcccatggtgcatctgctgccctat
tgggatttcaatgacggtcagatgatagatgttcgcatctgctccaatgcgccaaaagta
gaattacgactcaatggggaaaccgtgggtacgcatgacattgaccatgcacgaggaaga
gagctggttgggtggtggaagattccttacgtcaaaggcgaattgaaagcgatagcttat
gacgaaacaggccgtatcgtagccacggatgtaaaacgatcgtttggcaatgccaagcgg
atcgtcctgcgtccggataaagaagagctgagggccgatggaacagatctcatcttcgtt
gagatcaccatggaagatgaggatgggtactccgtcgagaatgccaataaccgggtggag
gtccatgtcacgggggcgggacggctgctgggtctcgataatggggacagcacggattac
gatccgtacaaaggcctaagcagaagactgttcagcggcaagctgatggcgatcatcggt
gcgacattggagcccggcggaatcgggatcgaggtgtcctccacaggcatggagcgtcaa
tcccttcgtttgacttccatacccgtacaggatgatgtgacgcaaggagtatccgcaagc
atgaggaatgaggagggaccatgcctgacaggaaacagggacgagattccgcttcgcaag
attgagctgatcagcgaaaagggtcaggtctttgatccggcgaatcgacaaatgacagtg
cgggccatattgcatccactggcagcttcttatcaggaagtcgaatgggccgtcgtaaac
gatgccggcatcgaatccaatattgcgagcgtcgaggccaatggccatgctgccatcgta
acagcccttggcgacggggaatttcgattaagatgtacgagccggaacgggacaggtaaa
acccggctcatctcccagcttgaatttaaggtcgacggtttgggtgcagcatacaaggat
ccatactctttcatatctgctggattatatgattacagtcaaggtgaagtcgggaacgga
aacgaaagaggcgtagccacgagcagagacggcgagacgcaggtcgggttccgggacatc
gattttggcccccatggctccgatacgattacgattccgatatttgctctttcaagcgaa
gcgtacgctttgcaaatctgggagggcatgcctggcgaagagggcagctccctgctggcc
gattgcatttatcagaaggagtccaaatggaacgtgtatcaggaagaaacctaccgattg
tccaagaagctgcgcggcattacgtcgatttgctttgtccttcgccagaaggtgcacatc
aaagggttttattttcaaccggggaatcgagcctttgagcccaactttgccgccgattgc
gaccggatttacggggatacctttacggtgttggacaacaggtttgttcaagggatagga
aataacgtctccctcgagtttgacgagatggattttttagccgacggtgcatcgaaactg
gtggtgtacggcagatccgccttagataaaaatacgattcatattcggtttgcgcattcg
gatggcgaaagcaaccggctggtcgaatttaggcaagcctacgaatatgaagagcaggta
ttcgatctggagcccgtggccggcaaacagaaggtgacgttcatcttcctgccgggaagc
caatttgattttggctggttccgatttgtgcgaacagattcataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GYM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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