KEGG   Paenibacillus sp. Y412MC10: GYMC10_4596
Entry
GYMC10_4596       CDS       T01100                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
gym  Paenibacillus sp. Y412MC10
Pathway
gym03030  DNA replication
gym03430  Mismatch repair
gym03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GYMC10_4596
   03430 Mismatch repair
    GYMC10_4596
   03440 Homologous recombination
    GYMC10_4596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gym03032]
    GYMC10_4596
   03400 DNA repair and recombination proteins [BR:gym03400]
    GYMC10_4596
Enzymes [BR:gym01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GYMC10_4596
DNA replication proteins [BR:gym03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GYMC10_4596
DNA repair and recombination proteins [BR:gym03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GYMC10_4596
SSDB
Motif
Pfam: RNase_T DEDDh_C Rv2179c-like RNase_H_2 Myosin-VI_CBD
Other DBs
NCBI-ProteinID: ACX66817
UniProt: D3EA52
Position
complement(5195504..5196244)
AA seq 246 aa
MTEPVQSNGGFWRSLRSGNINSAIASMRGAQTAQQLAFIRSQMKDNRRPEVLGTPLDELE
VVVFDLETTGFNHQHGDEILSFGAIRVIGEQVIENETFHMIVNSGAPVSPFIAELTGITQ
QMVDAAPPLMEGLHDFMAFIGGRVLVAHAAAHDRGFLNAALWKTSKVRLTHRLLDTMMLA
QRLYPEQKDYSLDELLRSSGIPVEGRHHALSDARMTARLWADYMKDIQARGQATTLGDLY
VYLSEG
NT seq 741 nt   +upstreamnt  +downstreamnt
atgactgaaccggtacaatcgaacggcggtttctggagatcgcttcgttcgggtaacatc
aattccgccatcgcctccatgcgcggggcgcagacagcccagcagttggcattcatccga
tcccagatgaaggataaccggaggccggaggttctgggcaccccgctggacgagctggag
gttgtcgtattcgatctggagacgacggggttcaatcatcagcacggcgatgaaatattg
tctttcggtgcgatccgggtcatcggggagcaggtgatcgagaatgaaacctttcatatg
atcgtgaacagcggtgccccggtgtctccattcattgccgagcttacgggtatcacgcag
caaatggttgatgcagccccgcctttaatggaggggctgcatgatttcatggcctttatc
ggggggagggtgcttgttgcccatgccgccgcgcatgaccggggtttcttgaacgccgcc
ttgtggaagacctccaaggttcgattaacgcatcggcttctcgatacgatgatgctcgcg
cagaggttatatcccgaacagaaggattacagtctggatgagctgctgcgaagcagcggc
attccggtagagggaaggcaccatgctctgtccgatgcgcgcatgaccgcccggctgtgg
gcggattacatgaaagacattcaggcgcgcggccaggctaccacgctaggagatttatac
gtctatctaagcgaggggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system