KEGG   Paenibacillus sp. Y412MC10: GYMC10_4911Help
Entry
GYMC10_4911       CDS       T01100                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gym  Paenibacillus sp. Y412MC10
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gym00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GYMC10_4911
Enzymes [BR:gym01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GYMC10_4911
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GYMC10_4911
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5566437..5567270)
Genome map
AA seq 277 aa AA seqDB search
MPELPEVETVKRTLNQLIKGKHIDHVSVNLPRIIQRPDDIEAFAFMLKGHTVEGVERRGK
FLRILLDGLVLVSHLRMEGRYGVYRAEEPVEKHTHVIFHFSDGTELRYKDVRQFGTMHLF
APGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVLLNQAYVVGIGNIYVDEA
LFRAKIHPERNANSLKDAELKRLYHAIVDTLSEAVDAGGSSIKSYVNGQGEMGMFQNSHQ
IYGRKDKPCHACGGPIHKIVVGGRGTHYCPKCQPVKK
NT seq 834 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccggaagtagaaaccgtgaaacgaacactgaaccaattgattaaaggt
aagcatatagatcacgtatccgtgaacctgccgcggattatccagcgtcctgacgatatc
gaggcatttgcttttatgttaaagggccataccgtggaaggcgtggagcgccgcgggaag
tttttgcggatcttgctggacgggctggtgctcgtttcgcatcttcggatggaggggcgt
tacggggtgtaccgagccgaggagccggtggagaagcatacccatgtcatcttccatttc
tcggacgggacggagctgcggtacaaggacgtgcgccaattcggaacgatgcatctattt
gcgccgggggaagagttccagcatgctccccttgccaagcttggttatgagccgctggat
gacacgtttacgttcggaaccttcaaggaagtcatcggcaccaagaaaacgaagatcaag
gcggtgctgctgaatcaggcatatgtggtcggcatcggcaatatatatgttgatgaggcc
ttgttccgggccaagattcatccggagcggaacgcgaacagcctgaaggacgccgagctt
aagcgattgtatcatgcgatcgtggatacgttgtccgaagccgtcgacgcgggcggatct
tccatcaagtcctatgtcaacgggcagggcgagatggggatgttccagaacagccatcag
atttacggtcggaaggacaagccatgccatgcgtgcggcggcccgattcataagatcgtg
gtcggcggacgggggacccattactgcccgaagtgtcagccggtcaagaagtaa

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