KEGG   Paenibacillus sp. Y412MC10: GYMC10_6251
Entry
GYMC10_6251       CDS       T01100                                 
Name
(GenBank) uracil-DNA glycosylase superfamily
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
gym  Paenibacillus sp. Y412MC10
Pathway
gym03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GYMC10_6251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gym03400]
    GYMC10_6251
Enzymes [BR:gym01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     GYMC10_6251
DNA repair and recombination proteins [BR:gym03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GYMC10_6251
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ACX68454
UniProt: D3EJ35
Position
complement(7014933..7015481)
AA seq 182 aa
MKHCERCELCKQRNRFIWGEGNPQGSLMMILDNPGAREDREDREGNPFLYGTRETLQLGM
REAGMDIHSVYVAYLLKRRPTRAYDKPATRAACLPHLQSQLLQKQPLLLFGFGNVVVEGL
FPQKENATVKELRGSWHEFEGIPIGFTYHPLAVRRRLNLLRFFVEDLKGLRAKWEERAGR
GT
NT seq 549 nt   +upstreamnt  +downstreamnt
atgaagcattgcgaacgctgcgaattgtgcaaacaacggaatcgcttcatctggggtgaa
ggcaatccgcaaggctcgctgatgatgatcctggataatccgggagcccgggaagaccgg
gaagaccgggaaggaaatccgttcttgtacgggacccgggaaaccctccaactcggcatg
agggaagcgggcatggatatccactcggtttacgtcgcctatttgctgaaacgccggcca
acccgtgcttacgataagcctgcaacccgagccgcatgccttccgcatttgcagtcgcag
ctccttcagaagcagccgctattattatttggctttggcaatgtcgtagtcgaaggatta
ttcccgcagaaggagaatgccaccgtcaaggagctgcgggggagctggcatgaatttgaa
ggaatcccgattggctttacctatcatccgctggccgttagaagaagactcaatttgcta
agattctttgtcgaggatttgaaaggtttgagggcgaagtgggaggagagagcagggagg
gggacataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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