KEGG   Halohasta litchfieldiae: halTADL_0857
Entry
halTADL_0857      CDS       T05239                                 
Name
(GenBank) transcription initiation factor TFIIE subunit alpha
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
hae  Halohasta litchfieldiae
Pathway
hae03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hae00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    halTADL_0857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hae03021]
    halTADL_0857
Transcription machinery [BR:hae03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     halTADL_0857
 Prokaryotic type
  Archaeal type
    TFE
     halTADL_0857
SSDB
Motif
Pfam: TFIIE_alpha GntR Sigma70_r3 zinc-ribbons_6 HTH_20 Rad50_zn_hook
Other DBs
NCBI-ProteinID: ATW87653
Position
complement(829362..829886)
AA seq 174 aa
MAFEDLLNDPVIQKYLHELVGPEGMPVAAAPPDGEVTDEELAEQLDLELNTVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFHYDNIPENLEEEMHRLLEAIEEREEYERMHEFYLCE
VCSIRFEFGEAMDFGFECPECASPLESMDNDRLVDALEDRVDALRDELNVDIHA
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcttttgaggatctgctgaacgacccggttatccagaagtacctccacgaactggtt
ggaccggaggggatgcccgtggcggcggccccgccggatggcgaagtaacggacgaagag
ctggcagagcagttggatctcgaactgaacacggttcgccgtgcgctgttcatcctctac
gagaacgatctggcctcctaccgtcggctccgcgacgaggattcgggctggttgacctat
ctgtggacgttccactacgacaacattcccgagaacctcgaagaggagatgcaccgcctt
cttgaggcaatcgaggagcgcgaagagtacgaacgcatgcacgagttctatctctgtgag
gtgtgttcgatccgcttcgagttcggtgaggcgatggacttcggcttcgaatgtccggag
tgtgcctccccgctcgaatcgatggacaacgaccgactcgtcgacgccttggaggaccga
gtcgacgcccttcgtgacgaactcaacgtggacattcacgcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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