KEGG   Halophilic archaeon DL31: Halar_1865
Entry
Halar_1865        CDS       T01603                                 
Name
(GenBank) AAA family ATPase, CDC48 subfamily
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
hah  Halophilic archaeon DL31
Brite
KEGG Orthology (KO) [BR:hah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hah03019]
    Halar_1865
   03009 Ribosome biogenesis [BR:hah03009]
    Halar_1865
   04131 Membrane trafficking [BR:hah04131]
    Halar_1865
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hah04147]
    Halar_1865
Messenger RNA biogenesis [BR:hah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     Halar_1865
Ribosome biogenesis [BR:hah03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    Halar_1865
Membrane trafficking [BR:hah04131]
 SNARE
  SNARE associated proteins
   Others
    Halar_1865
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    Halar_1865
Exosome [BR:hah04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Halar_1865
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N CDC48_2 AAA_16 RuvB_N AAA_5 TIP49 AAA_22 AAA_2 AAA_33 AAA_14 nSTAND3 RNA_helicase IstB_IS21 AAA_28 AAA_18 AAA_7 Mg_chelatase Sigma54_activat ATPase AAA_3 AAA_17 DUF815 NB-ARC ABC_tran AAA_24 Parvo_NS1 Zeta_toxin AAA_11 AAA_30 Vps4_C AAA_25 TsaE PhoH bpMoxR KAP_NTPase SLFN-g3_helicase NACHT IPT Zot
Other DBs
NCBI-ProteinID: AEN05575
Position
1124990..1127212
AA seq 740 aa
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEAEKAKKLVLAPPEEASVQFGSEAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPDGVCLVTEDTEVELREEPISGYD
KTGGGITYEDIGGLEDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLDSRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GRKEVLQIHTRGMPLSDGVDLDHLADETHGFVGADIESLGKEAAMKALRRYLPKIDLDEE
DIPPSLIDRMIVNKKDFQGALNEVEPSAMREVLVELPKITWEDVGGLEDPKQQVKEAVEW
PLSNPEKFDRMGIEAPKGVLLYGPPGTGKTLMAKAVANETNANFISIRGPQLLSKWVGES
EKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEEMGEV
MVIAATNRPDMIDPALIRSGRFDRLVLIGAPDEVGRKKILDIHTEDTPLSPDVSLKEIAE
ITDGYVGSDLESICREAAIEALRESDDADDVEMSHFRKAIESVRPTITEDLMSYYEEVEK
EFRGSAKSQLDRGGPRHGFQ
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgaacgaagtccaactggaggtcgcgaaggcgtacccgaacgactcgggtcgcggtatc
gcccggctcgaccccgatacgctgctgcatctaaagctctcacccggcgacatcatcgag
atcgagggggccgagacgaccgccgcgaaggtctggcgggccgaccggcaggactggaac
accgacaccgtccgaattgacgggtttacccgccagaacgccgacgtgggaatcggcgag
cgggtgaccatccgcaaggccgaagccgagaaggccaagaagctggtgctggccccgccc
gaggaggcctcggtccagttcggctccgaagccgcaggaatggtcaaacgccagattctg
aagcgcccggtcgtcgagcgtgacatcgttcccgtgatgtccagcacgaaccacccgttc
atgcgctcaccggggcaggccatcccgctcatcgctgtcgagaccgagcctgacggcgtc
tgtctggtcaccgaagacacggaggttgagctccgtgaggagccaatctcgggctacgac
aagaccggcggcggcatcacctacgaggatatcggtgggctggaagacgagattcagcgc
gtccgggagatggtcgagctgccgatgaaacaccctcaaatcttcaagaaactcggcatc
gagccgccacagggggtactgctccacgggccgcccggcaccgggaagacgctgctggcg
aaagccgtcgccaacgagacctccgcgagcttcttctctatcgcgggccccgagattatc
tcgaaatactacggcgaatccgaacagcaactccgggagatcttcgaggatgccaaagac
gacagcccatccatcatcttcatcgacgaactcgactccatcgcgcccaagcgtgaggac
gtgaccggcgaggtcgagcgtcgtgtcgttgctcagctgttgacgatgatggacggcctc
gactcccgcggccaggtcatcgtcatcgctgcgaccaaccgcgtcgacagcgttgacccc
gcgctccgccgccccggtcgcttcgaccgcgaaatcgagattggcgtccccgacgaggtg
ggtcgcaaagaggtgctccagattcacacccgtgggatgccgctctcagacggcgttgac
ctcgaccacctggctgacgagacccacggcttcgtcggcgccgacatcgagagcctgggc
aaggaggccgcgatgaaggccctgcgccggtacctccccaagatcgacctcgacgaggag
gatatcccgccgagcctcatcgaccggatgatcgtcaacaagaaggacttccagggcgcg
ctcaacgaggtcgaaccctccgcgatgcgcgaggtcctggtcgaactccccaaaatcacg
tgggaggacgttggcggtctcgaggaccccaaacagcaggtcaaggaggccgtcgagtgg
ccgctctcgaaccccgagaagttcgaccggatgggcattgaggcgccgaagggcgtgctg
ctctacggcccgcccggcaccgggaagacgctgatggcgaaagccgtcgccaacgagacc
aacgcgaacttcatctcgatccgcggcccgcaactcctctcgaagtgggtcggggagtcc
gagaaggccatccgccagacgttccggaaggcccgacaggtctcgcccaccattatcttc
ttcgacgagctcgactcgctcgcgcccagccggggacaggagatgggcaacaacgtctcc
gagcgcgtcgtgaaccagctcctgaccgaactcgacgggctggaggagatgggcgaggtg
atggtcatcgccgcgaccaaccgtccggacatgatcgaccccgcactcatccgctcgggc
cggttcgaccggctggtgctcatcggcgcccccgacgaggtgggccgcaagaaaatcctc
gatatccacaccgaggacaccccgctttcgccggacgtgagcctgaaagagattgccgaa
atcaccgacggctacgtcggatcggacctcgaatccatctgccgggaggctgccatcgag
gcacttcgggagagcgacgacgccgatgacgtggagatgagtcatttccggaaggccatc
gagtcagtccggccgaccatcactgaagatctgatgagctactacgaggaggtcgaaaag
gagttccgcggcagcgccaagagccaactcgaccgcggcggcccgcgccacggcttccag
tga

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Ontology (5)   
   KEGG BRITE (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (41)   
   Pfam (41)   
All databases (54)   

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