KEGG   Hipposideros armiger (great roundleaf bat): 109373916
Entry
109373916         CDS       T04661                                 
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
hai  Hipposideros armiger (great roundleaf bat)
Pathway
hai03008  Ribosome biogenesis in eukaryotes
hai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hai00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109373916 (XRN2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109373916 (XRN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hai03021]
    109373916 (XRN2)
   03019 Messenger RNA biogenesis [BR:hai03019]
    109373916 (XRN2)
   03009 Ribosome biogenesis [BR:hai03009]
    109373916 (XRN2)
   03016 Transfer RNA biogenesis [BR:hai03016]
    109373916 (XRN2)
Transcription machinery [BR:hai03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     109373916 (XRN2)
Messenger RNA biogenesis [BR:hai03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     109373916 (XRN2)
Ribosome biogenesis [BR:hai03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    109373916 (XRN2)
Transfer RNA biogenesis [BR:hai03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    109373916 (XRN2)
SSDB
Motif
Pfam: XRN_M XRN_N
Other DBs
NCBI-GeneID: 109373916
NCBI-ProteinID: XP_019483718
EnsemblRapid: ENSHARG00000017297
UniProt: A0A8B7Q802
Position
Unknown
AA seq 950 aa
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDGSKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVSIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDSLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSVSPNTSF
TSDGSPSPLGGIKRKAEDSDSDPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTESMDVPPELCHGIQG
KFSLDGEAILPDQIVCSPVPMLPDLTQNTAVSINFKDPQFAEDYIFKAVMLPGARKPAPV
LKPGDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGVYSNAAPPSVT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgggagtcccggcgttctttcgctggctcagtcgcaaatacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattcctgttgatggcagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaacgaggatgaaatgatggtttca
atttttgagtatattgacagacttttcaatattgtaagaccaagacgacttctctacatg
gcaatagatggagtggcaccacgtgctaaaatgaaccagcagcgttcgaggaggttcaga
gcatcaaaagaaggaatggaagcagcagtagagaaacagcgagtcagagaagaaatattg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgatagcaactgtatc
acaccaggaactgagttcatggacagtcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccccgggtggaaaaatttgacagttattttgtctgatgctagtgct
cctggtgaaggagagcataaaatcatggattacattagaagacaaagagctcagcctaac
catgacccaaacactcatcattgcttatgtggagcagatgctgatctcatcatgctcggc
cttgctacacatgaacccaactttaccattattagagaagaattcaaaccaaacaaaccc
aaaccgtgtggtctttgtaatcagtttggacatgaggtcaaggattgtgaaggtttgccg
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccttgtgcagagggagag
tttatctttcttcgtcttaatgttcttcgtgagtatttggaaagagagctcactatggcc
agcctaccgttcacatttgatattgagaggagcattgatgactgggtcttcatgtgcttc
tttgtgggaaatgacttccttcctcacctgccatcgttagagattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttcactcctggtggaatattaactcct
catgccttgggttcaagaaattcaccaggttctcaagtagccagtaatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcagtatctcctaatacgagtttc
acttctgatggctccccatctccattaggaggaattaagagaaaagcagaagacagtgac
agtgatcctgagccagaggataacgtcaggctatgggaagctggttggaaacagcggtac
tacaagaacaaatttgatgttgatgcagctgatgagaaatttcgtcgtaaagttgtacaa
tcttatgttgaagggctctgctgggttcttcgatattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgccccatttgcttcagactttgaaggtattgcagac
atgccttctgattttgagaagggcactaaaccgtttaaaccgttggaacaacttatggga
gtttttccagctgcaagtggtaactttctacctccttcatggcggaagctcatgagtgat
cctgattctagtataattgacttctaccctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctgttgccatttgtggatgagcgaaggctgcgagct
gccctagaagaagtatacccagacctcactccagaagagactagaagaaacagtcttgga
ggtgatgtcttatttgtggggaaacatcacccactccacgacttcattttagagctatac
cagacaggttccacagagtcaatggatgtaccgcctgaactatgtcatgggattcaagga
aagttttctttggatggagaagccatccttccagatcaaatagtatgttctcctgttccc
atgttaccggatctgacacagaacactgcagtcagtattaattttaaagacccgcagttt
gctgaagattacatttttaaagccgtaatgcttccgggagcaagaaaaccagcaccggta
ctgaaacctggtgactgggaaaaatccagcaatggacggcagtggaagccgcagcttggc
tttaatcgggaccggcggcctgtccacctggatcaggcagcattcaggactttgggccat
gttatgccgagaggctcaggaactggcgtttacagtaatgctgcaccaccatctgtgact
taccagggaaacttatacaggccgctgttgagaggacaagcccagattccaaaacttatg
tcgaatatgaggccccaggattcttggcgaggtcctcctccccttttccaacagcaaaga
tttgacagaggcgttggggctgaacctctgttgccttggaaccggatgctccaaacccaa
aatgcagccttccagccaaaccagtaccagatgctagccggacccggcgggtatccaccc
agacgtgatgatcgtggagggagacagggataccccagagaaggaagaaaataccctttg
ccaccaccctcaggaagatacagttggaattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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