KEGG   Halomonas sp. KO116: KO116_02019
Entry
KO116_02019       CDS       T03800                                 
Name
(GenBank) Uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
hak  Halomonas sp. KO116
Pathway
hak03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KO116_02019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hak03400]
    KO116_02019
Enzymes [BR:hak01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     KO116_02019
DNA repair and recombination proteins [BR:hak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     KO116_02019
 Prokaryotic type
     KO116_02019
SSDB
Motif
Pfam: UDG DUF294
Other DBs
NCBI-ProteinID: AJY50498
UniProt: A0A0D5M3Z6
Position
2155609..2156292
AA seq 227 aa
MANPLPDDWSQWLGDEFKADYMLALKEFLAQQKAAKKTIYPHSAQWFRAFELTPLHEVKV
VILGQDPYHGPNQAHGLSFSVRPGVQVPPSLANIYKELASDVGFKPVQHGNLDSWAKQGV
LLLNTSLTVEQGNAGSHRGKGWEVFTDRAIEAVSQHASPCVFLLWGSQARQKKALIDQSR
HLVLEAPHPSPLSAHRGFFGTRHFSQANQFLQAQGRTPIDWQLPETP
NT seq 684 nt   +upstreamnt  +downstreamnt
atggccaatccacttcctgacgattggagtcagtggctgggtgatgagtttaaggctgac
tatatgctcgcactaaaggagtttttggcgcagcagaaggcggctaaaaaaaccatttac
ccccactcagcgcaatggtttcgcgcctttgagttaacccctctgcatgaagtgaaagtc
gttatcttggggcaagatccttaccacggccccaaccaagctcatggcttgagtttctcc
gtacggcccggtgtacaggtgccgccttcgctagctaacatctacaaagagttggccagc
gatgtcggctttaaaccggtgcagcatggcaacttggatagttgggccaagcagggcgtc
ctgttattaaacacctcgttaacggttgaacaagggaatgctggttctcatcgcggcaag
gggtgggaggtattcactgaccgcgccattgaagccgttagccagcatgcgtcgccatgt
gtgtttttgttatggggaagtcaggcgcgccagaagaaagcattaattgaccagagtcgc
catttggtgcttgaagccccgcacccgtcgccgctctctgcgcatcgagggttttttggc
acccggcacttttcgcaagcaaatcaattcctgcaagcgcaggggcgcacgcctatcgac
tggcaattgccggaaaccccttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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