KEGG T03800: KO116

Halomonas sp. KO116: KO116_02585

Entry

KO116_02585       CDS       T03800

Name

(GenBank) DNA repair protein recO

K03584

DNA repair protein RecO (recombination protein O)

Organism

hak Halomonas sp. KO116

Pathway

hak03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:hak00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    KO116_02585
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hak03400]
    KO116_02585
DNA repair and recombination proteins [BR:hak03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     KO116_02585
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      KO116_02585

SSDB

Motif

Pfam:

RecO_N RecO_C

Other DBs

NCBI-ProteinID:

AJY51060

UniProt:

A0A0D5M4B1

Position

complement(2772736..2773431)

AA seq 231 aa
MAPEPAFLLHRRPYRETSALVDLLTLDHGRVRAVAHGGQRPGSKSRQRLQPFTPLFVTWQ
GSRDLKRLTLMESRGQTALLAGEGLLCGLYANEIATRLLPLELPAPDVFAFYTALLEALP
APAERALALRRYEWALLEALEATPQFTTPEGSVLDPQLRYRFDAATRAFSPAERGLDGRT
LRYIEQGDWQHDGLANALKAVMRAALAPHLGSTVLRSRELMLDLARRRHRP

NT seq 696 nt +upstreamnt +downstreamnt
atggcgcctgagccggctttcttacttcatcgccggccttaccgtgaaaccagtgcgctg
gtagatctactaacccttgaccacggcagagtgcgtgctgtagcccatggtgggcaacgg
cccggatcaaaatcgcgacaacgtttgcagccttttacaccgctattcgtgacgtggcag
ggcagccgtgatttaaagcggctgacgctgatggaatcacgcggccaaacggcattatta
gcgggtgaaggcttgctatgtgggctttacgccaatgagatcgccacccgactattgccg
ctagagttgccagcccctgatgtgttcgccttttatacggcgctgctggaagcattgcca
gcgcccgctgagagggcgttggcgttgcgccgttatgagtgggcgctattggaagcgctg
gaagcaacgccgcagtttacaacaccggagggtagcgttttggatccccagctgcgctat
cgttttgatgcagcgacgcgcgctttttccccggccgaacgcggtttagatggccgcacg
ctgcgctatattgaacagggtgactggcagcatgatgggctcgctaacgctttgaaggcg
gtgatgcgtgccgcactggcaccgcacctgggttccaccgtcttacgctcgcgggaatta
atgctcgatttagcgcgccgccgccatcgtccctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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