KEGG T00038: VNG0308Gm

Halobacterium sp. NRC-1: VNG0308Gm

Entry

VNG0308Gm CDS T00038

Gene name

trpA

Definition

tryptophan synthase subunit alpha (EC:4.2.1.20)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

hal Halobacterium sp. NRC-1

Pathway

hal00260	Glycine, serine and threonine metabolism
hal00400	Phenylalanine, tyrosine and tryptophan biosynthesis
hal01100	Metabolic pathways
hal01110	Biosynthesis of secondary metabolites
hal01230	Biosynthesis of amino acids

Module

hal_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:hal00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hal00400]

SSDB

Motif

Pfam:

Trp_syntA His_biosynth PcrB PA PhnG

Other DBs

NCBI-GI:

16554463

NCBI-GeneID:

1449015

UniProt:

Q9HSB9

Position

242582..243412

AA seq 276 aa
MTRSDLAAAFDDGPALVSYVVAGDPTPAATAEYIDALVDGGTDVIELGLPFSEPVAEGTT
IQNAIKRALDAGMTPDAYLDLVARIDADVPVVCMTYYNLLFQYGDRAGPAAFVSAAAEAG
VSGFVVPDLPVDESGPLREACRAHGLDLVFVVAPTTTADRRERMLDLTTGFVYVQGRVGT
TGAREEVSAATPDALAALQHTDIPKAVGFGVSSGEQAREITASGADGVIVGSAYVDTVAD
GVADDDPPSVVADRLRDLAAELKAGAARGVPEPEHK

NT seq 831 nt +upstreamnt +downstreamnt
gtgacccgcagcgacctcgccgcggccttcgacgacggcccggcgctggtgtcgtacgtg
gtcgcgggcgatccgacgcccgccgcgaccgccgagtacatcgacgcgctcgtggacggc
ggcacggacgtgatcgaactcgggctgccgttcagcgaacccgtcgcggaggggacaacc
atccagaacgcgatcaagcgcgcgctcgatgccggcatgacgcccgacgcctacctggat
ctcgtggcgcgcatcgacgccgacgtgccggttgtctgtatgacctactacaacctcctg
ttccagtacggcgaccgcgccgggcccgcggcgttcgtctccgcggcggccgaggcgggc
gtctccgggttcgtggttccggatctgcccgtcgacgagtccggcccgctccgggaggcg
tgtcgcgcccacggcctcgatctcgtgttcgtcgttgcgccgacgaccaccgccgaccgc
cgcgagcgcatgctcgatctgaccaccgggttcgtctacgtgcagggccgggtcggcacg
acgggtgcccgtgaggaagtcagcgcggcgacgccggacgcgctcgcggccctccagcac
acggacatcccgaaggccgtggggttcggcgtctcctcgggcgagcaggcccgcgagatc
acggccagcggtgctgacggcgtcatcgtggggagcgcgtacgtcgacacggtcgccgac
ggtgttgccgacgacgacccccccagcgtggtcgccgatcgcctgcgggacctcgccgcc
gagctgaaggccggcgccgctcggggcgtgccggaaccggaacacaaatag

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

Download RDF

DBGET integrated database retrieval system