KEGG   Halomonas sp. R57-5: HALO1266
Entry
HALO1266          CDS       T04029                                 
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
ham  Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:ham00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ham03016]
    HALO1266
Enzymes [BR:ham01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     HALO1266
Transfer RNA biogenesis [BR:ham03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HALO1266
 Prokaryotic type
    HALO1266
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: CEP34948
UniProt: A0A0D6E5F5
Position
I:1379428..1380459
AA seq 343 aa
MINMPEWQRSLDAHFGPPKPGQYRAQPEDFWVDEQLDFTPEAHGEHLWLRVEKRNQTTLD
VVKTLSRLCGVTPRDIGYSGMKDRIAVTRQWLSVHLPGRDAPPELEQSLTVLGITVVEQA
RHPRKLKRGVHRTNRFVLRLSGEAIEGEDFIARWETLCQQGVPNYFGPQRFGPEGRNLQR
AEALLNRGWRKRDDRQGMMLSTARSFLFNELLSARIADGTWAQPLAGDTLMLDGTQSVFR
IDASDATLQARAAELDVHPTGVLWGVGESEQGDAAGYTARLLQHYPELCSGLERSGVKQA
RRALRMRLLEPQLAWEPGAVRLAFALPRGSFATAALGELMLAG
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgattaatatgcctgagtggcagcgcagcttggatgctcatttcggcccgcccaaaccg
ggccagtaccgtgcccagccggaggatttttgggtcgacgagcagcttgattttacccct
gaggcacacggtgaacatctatggctgcgcgttgaaaagcgcaatcaaaccacgttagat
gtggtaaaaacattaagtcggctttgcggcgtgacaccccgtgatattggttactcaggc
atgaaagaccgtatagccgtaacccgccagtggctgagtgtgcatttgcccggccgtgac
gcgccacctgagcttgagcagtcgcttactgtgctgggtatcacggtggttgaacaggcg
cgccacccccgtaagctcaaacgtggtgttcaccgtacgaatcggtttgttttgcgcttg
agcggtgaggccattgaaggtgaagactttatcgcccgctgggagacactttgccagcag
ggcgtgcccaactattttggcccccagcgctttgggcctgaggggcgtaatcttcagcgt
gcagaggcattacttaaccgaggttggcgaaaacgcgacgatcgccagggtatgatgctc
tctacggcacgcagttttttgtttaacgaactgcttagcgcgcgaatcgcggatggcacc
tgggcgcagccgctggcaggcgatacgttgatgctggacggcacgcaaagcgtgtttcgt
atcgacgcctccgatgcaacgcttcaggcccgcgccgctgagctggatgttcaccccacc
ggggtgctttggggcgttggcgagtccgagcaaggcgacgcagctggctacacagcacgt
ttgttgcagcactaccccgagctatgcagcggtttagagcgcagcggtgtaaagcaggcg
cgccgggcactgcgcatgcggctgctggaaccacagcttgcgtgggaacctggcgccgtt
cggcttgcgtttgcgctgccgcgggggagttttgccaccgccgcgctgggtgagcttatg
ttggcaggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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